Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   E3C75_RS06485 Genome accession   NZ_CP038020
Coordinates   1221651..1222298 (-) Length   215 a.a.
NCBI ID   WP_014608171.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1216651..1227298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS06465 holA 1216981..1218015 (+) 1035 WP_002946639.1 DNA polymerase III subunit delta -
  E3C75_RS06470 sodA 1218110..1218715 (+) 606 WP_011680996.1 superoxide dismutase SodA -
  E3C75_RS06475 - 1218794..1220043 (-) 1250 Protein_1244 ISL3 family transposase -
  E3C75_RS06480 - 1220177..1221610 (+) 1434 WP_111679540.1 serine hydrolase -
  E3C75_RS06485 cclA/cilC 1221651..1222298 (-) 648 WP_014608171.1 A24 family peptidase Machinery gene
  E3C75_RS06490 - 1222407..1222928 (+) 522 WP_011680999.1 Dps family protein -
  E3C75_RS06495 - 1222981..1223178 (-) 198 Protein_1248 prepilin peptidase -
  E3C75_RS06500 - 1223287..1223808 (+) 522 WP_111679541.1 Dps family protein -
  E3C75_RS06505 - 1223897..1224334 (+) 438 WP_100262404.1 Fur family transcriptional regulator -
  E3C75_RS06510 - 1224444..1224650 (+) 207 WP_022096801.1 YqgQ family protein -
  E3C75_RS06515 - 1224643..1225611 (+) 969 WP_084825911.1 ROK family glucokinase -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 24867.98 Da        Isoelectric Point: 8.5469

>NTDB_id=309241 E3C75_RS06485 WP_014608171.1 1221651..1222298(-) (cclA/cilC) [Streptococcus thermophilus strain ATCC 19258]
MLSILYFFLGTSLGSFIGLICDRFPEKSIIFPRSHCNQCGHPLRFFEMIPILSQLFLRFKCRLCQSSIPYRYLFLELFCG
GILLLYFYNYLDFGRTYLLFFSLCLTIFDLKNKSYPLLIWILGTLPLLCLGNHYLTFSLGISLAVLSYIKRLNIGEGDFL
YLASVSLIFPFSKILIAIELACSFGLMYFLVRKNPNETVAFVPFLFISVLILTFM

Nucleotide


Download         Length: 648 bp        

>NTDB_id=309241 E3C75_RS06485 WP_014608171.1 1221651..1222298(-) (cclA/cilC) [Streptococcus thermophilus strain ATCC 19258]
ATGCTTAGTATTTTATATTTTTTTCTTGGTACCTCTTTAGGCTCGTTTATTGGATTGATTTGTGATCGTTTTCCTGAGAA
GTCGATTATTTTTCCTAGAAGCCATTGCAATCAGTGTGGGCATCCGTTACGTTTTTTCGAAATGATTCCGATCCTATCAC
AACTTTTCTTAAGGTTCAAATGTCGGTTATGTCAAAGCTCTATCCCATACCGTTATCTCTTCTTGGAATTGTTTTGTGGA
GGAATACTTCTTCTTTATTTCTATAACTACCTAGATTTTGGAAGAACCTATTTGCTTTTTTTCAGTCTTTGTCTAACTAT
TTTTGATTTAAAAAATAAATCATATCCCCTTCTAATTTGGATTCTTGGAACACTACCTCTCCTATGTTTGGGAAACCACT
ACCTCACTTTTAGCTTAGGAATAAGTTTAGCCGTTCTGTCATATATCAAACGTTTAAATATTGGTGAAGGTGATTTTCTC
TATTTGGCCAGTGTCTCCCTCATTTTCCCATTTTCCAAAATACTAATAGCTATTGAACTAGCTTGCTCATTTGGGCTTAT
GTACTTCCTAGTACGTAAAAACCCTAATGAAACAGTCGCTTTTGTCCCATTTCTCTTTATTAGTGTTCTAATTCTTACCT
TCATGTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

39.72

99.535

0.395
  cclA/cilC Streptococcus pneumoniae TIGR4

39.72

99.535

0.395
  cclA/cilC Streptococcus mitis NCTC 12261

39.252

99.535

0.391
  cclA/cilC Streptococcus pneumoniae Rx1

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae D39

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae R6

38.785

99.535

0.386

Multiple sequence alignment