Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DZM45_RS01805 | Genome accession | NZ_CP031638 |
| Coordinates | 335575..336066 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain MGAS8347 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 330575..341066
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZM45_RS01775 (DZM45_01775) | - | 331864..332364 (+) | 501 | WP_021340895.1 | phosphatase PAP2 family protein | - |
| DZM45_RS01780 (DZM45_01780) | trxA | 332427..332759 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DZM45_RS01785 (DZM45_01785) | - | 332811..333399 (-) | 589 | Protein_293 | helix-turn-helix transcriptional regulator | - |
| DZM45_RS01790 (DZM45_01790) | mutY | 333475..334629 (-) | 1155 | WP_011285126.1 | A/G-specific adenine glycosylase | - |
| DZM45_RS01795 (DZM45_01795) | - | 334797..335090 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DZM45_RS01800 (DZM45_01800) | rpsF | 335263..335553 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DZM45_RS01805 (DZM45_01805) | ssb | 335575..336066 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DZM45_RS01810 (DZM45_01810) | rpsR | 336231..336470 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DZM45_RS01815 (DZM45_01815) | - | 336603..337259 (-) | 657 | WP_011285125.1 | DUF1129 domain-containing protein | - |
| DZM45_RS01820 (DZM45_01820) | - | 337392..338336 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=309100 DZM45_RS01805 WP_002983122.1 335575..336066(+) (ssb) [Streptococcus pyogenes strain MGAS8347]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=309100 DZM45_RS01805 WP_002983122.1 335575..336066(+) (ssb) [Streptococcus pyogenes strain MGAS8347]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |