Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DZN89_RS01805 | Genome accession | NZ_CP031634 |
| Coordinates | 335577..336068 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain MGAS11108 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 330577..341068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZN89_RS01775 (DZN89_01775) | - | 331866..332366 (+) | 501 | WP_021340895.1 | phosphatase PAP2 family protein | - |
| DZN89_RS01780 (DZN89_01780) | trxA | 332429..332761 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DZN89_RS01785 (DZN89_01785) | - | 332813..333401 (-) | 589 | Protein_292 | helix-turn-helix transcriptional regulator | - |
| DZN89_RS01790 (DZN89_01790) | mutY | 333477..334631 (-) | 1155 | WP_011285126.1 | A/G-specific adenine glycosylase | - |
| DZN89_RS01795 (DZN89_01795) | - | 334799..335092 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DZN89_RS01800 (DZN89_01800) | rpsF | 335265..335555 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DZN89_RS01805 (DZN89_01805) | ssb | 335577..336068 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DZN89_RS01810 (DZN89_01810) | rpsR | 336233..336472 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DZN89_RS01815 (DZN89_01815) | - | 336605..337261 (-) | 657 | WP_011285125.1 | DUF1129 domain-containing protein | - |
| DZN89_RS01820 (DZN89_01820) | - | 337394..338338 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=308889 DZN89_RS01805 WP_002983122.1 335577..336068(+) (ssb) [Streptococcus pyogenes strain MGAS11108]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=308889 DZN89_RS01805 WP_002983122.1 335577..336068(+) (ssb) [Streptococcus pyogenes strain MGAS11108]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |