Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DZR90_RS07820 | Genome accession | NZ_CP031629 |
| Coordinates | 1538871..1539362 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain MGAS28278 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1533871..1544362
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZR90_RS07805 (DZR90_07795) | - | 1536601..1537545 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| DZR90_RS07810 (DZR90_07800) | - | 1537678..1538334 (+) | 657 | WP_011285125.1 | DUF1129 domain-containing protein | - |
| DZR90_RS07815 (DZR90_07805) | rpsR | 1538467..1538706 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DZR90_RS07820 (DZR90_07810) | ssb | 1538871..1539362 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DZR90_RS07825 (DZR90_07815) | rpsF | 1539384..1539674 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DZR90_RS07830 (DZR90_07820) | - | 1539847..1540140 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| DZR90_RS07835 (DZR90_07825) | mutY | 1540308..1541462 (+) | 1155 | WP_011285126.1 | A/G-specific adenine glycosylase | - |
| DZR90_RS07840 (DZR90_07830) | - | 1541538..1542126 (+) | 589 | Protein_1461 | helix-turn-helix transcriptional regulator | - |
| DZR90_RS07845 (DZR90_07835) | trxA | 1542178..1542510 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| DZR90_RS07850 (DZR90_07840) | - | 1542573..1543073 (-) | 501 | WP_021340895.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=308649 DZR90_RS07820 WP_002983122.1 1538871..1539362(-) (ssb) [Streptococcus pyogenes strain MGAS28278]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=308649 DZR90_RS07820 WP_002983122.1 1538871..1539362(-) (ssb) [Streptococcus pyogenes strain MGAS28278]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |