Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DZS39_RS01805 | Genome accession | NZ_CP031628 |
| Coordinates | 335587..336078 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain MGAS28330 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 330587..341078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZS39_RS01775 (DZS39_01775) | - | 331876..332376 (+) | 501 | WP_021340895.1 | phosphatase PAP2 family protein | - |
| DZS39_RS01780 (DZS39_01780) | trxA | 332439..332771 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| DZS39_RS01785 (DZS39_01785) | - | 332823..333411 (-) | 589 | Protein_293 | helix-turn-helix transcriptional regulator | - |
| DZS39_RS01790 (DZS39_01790) | mutY | 333487..334641 (-) | 1155 | WP_011285126.1 | A/G-specific adenine glycosylase | - |
| DZS39_RS01795 (DZS39_01795) | - | 334809..335102 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| DZS39_RS01800 (DZS39_01800) | rpsF | 335275..335565 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| DZS39_RS01805 (DZS39_01805) | ssb | 335587..336078 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| DZS39_RS01810 (DZS39_01810) | rpsR | 336243..336482 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| DZS39_RS01815 (DZS39_01815) | - | 336615..337271 (-) | 657 | WP_011285125.1 | DUF1129 domain-containing protein | - |
| DZS39_RS01820 (DZS39_01820) | - | 337404..338348 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=308570 DZS39_RS01805 WP_002983122.1 335587..336078(+) (ssb) [Streptococcus pyogenes strain MGAS28330]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=308570 DZS39_RS01805 WP_002983122.1 335587..336078(+) (ssb) [Streptococcus pyogenes strain MGAS28330]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |