Detailed information NTG0308337

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: EZV63_RS11095
• Genome accession: NZ_CP036534
• Coordinates: 2541791..2543077 (-)
• Length: 428 a.a.
• NCBI ID: WP_031040350.1
• Uniprot ID: A0ABS7WDK0
• Organism: Streptomyces sp. VN1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2536791..2548077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EZV63_RS11085 (EZV63_11210)	-	2537936..2540560 (-)	2625	WP_037767069.1	valine--tRNA ligase	-
EZV63_RS11090 (EZV63_11215)	-	2540697..2541686 (+)	990	WP_037767071.1	hypothetical protein	-
EZV63_RS11095 (EZV63_11220)	clpX	2541791..2543077 (-)	1287	WP_031040350.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
EZV63_RS11100 (EZV63_11225)	clpP	2543269..2543982 (-)	714	WP_031040348.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EZV63_RS11105 (EZV63_11230)	clpP	2544033..2544638 (-)	606	WP_031040345.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EZV63_RS11110 (EZV63_11235)	tig	2545007..2546446 (-)	1440	WP_070388077.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46828.59 Da
• Isoelectric Point: 4.7389

>NTDB_id=308337 EZV63_RS11095 WP_031040350.1 2541791..2543077(-) (clpX) [Streptomyces sp. VN1]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=308337 EZV63_RS11095 WP_031040350.1 2541791..2543077(-) (clpX) [Streptomyces sp. VN1]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGAGCA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTGGCGCGCATGCTGAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCCTCGATCACCCGCGACGTCTCGGGCGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCCCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGAGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTGCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCCACGCTGATCCCCCGGGATTCGCGCGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCCTGA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.027	94.159	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521