Detailed information NTG0030739

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACICU_RS16840
• Genome accession: NC_010611
• Coordinates: 3566550..3567032 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046420.1
• Uniprot ID: A0A7U3Y2Y6
• Organism: Acinetobacter baumannii ACICU
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3561550..3572032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACICU_RS16805 (ACICU_03358)	-	3561656..3562690 (+)	1035	WP_012391995.1	lipase secretion chaperone	-
ACICU_RS16810 (ACICU_03359)	-	3562805..3563746 (+)	942	WP_085916958.1	triacylglycerol lipase	-
ACICU_RS16815 (ACICU_03360)	rplS	3563799..3564167 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ACICU_RS16820 (ACICU_03361)	trmD	3564376..3565116 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACICU_RS16825 (ACICU_03362)	rimM	3565162..3565710 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACICU_RS16830 (ACICU_03363)	rpsP	3565730..3565981 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ACICU_RS16835 (ACICU_03364)	pilE	3566128..3566553 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ACICU_RS16840 (ACICU_03365)	pilY2	3566550..3567032 (-)	483	WP_001046420.1	type IV pilin protein	Machinery gene
ACICU_RS16845 (ACICU_03366)	pilY1	3567045..3570899 (-)	3855	WP_000768964.1	PilC/PilY family type IV pilus protein	Machinery gene
ACICU_RS16850 (ACICU_03367)	pilX	3570911..3571729 (-)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17548.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=30739 ACICU_RS16840 WP_001046420.1 3566550..3567032(-) (pilY2) [Acinetobacter baumannii ACICU]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=30739 ACICU_RS16840 WP_001046420.1 3566550..3567032(-) (pilY2) [Acinetobacter baumannii ACICU]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

3D structure

• AlphaFold DB: A0A7U3Y2Y6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	97.5	100	0.975
comE	Acinetobacter baylyi ADP1	40.116	100	0.431