Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | DVV14_RS10290 | Genome accession | NZ_CP031472 |
| Coordinates | 2248594..2249241 (+) | Length | 215 a.a. |
| NCBI ID | WP_006958300.1 | Uniprot ID | A0A097QHL5 |
| Organism | Vibrio coralliilyticus strain RE22 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2243594..2254241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DVV14_RS10275 (DVV14_10335) | - | 2244165..2245604 (-) | 1440 | WP_064488115.1 | MSHA biogenesis protein MshI | - |
| DVV14_RS10280 (DVV14_10340) | csrD | 2245601..2247616 (-) | 2016 | WP_006958298.1 | RNase E specificity factor CsrD | - |
| DVV14_RS10285 (DVV14_10345) | ssb | 2247764..2248312 (-) | 549 | WP_006958299.1 | single-stranded DNA-binding protein | Machinery gene |
| DVV14_RS10290 (DVV14_10350) | qstR | 2248594..2249241 (+) | 648 | WP_006958300.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| DVV14_RS10295 (DVV14_10355) | galU | 2249359..2250231 (+) | 873 | WP_006958301.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| DVV14_RS10300 (DVV14_10360) | uvrA | 2250371..2253193 (+) | 2823 | WP_064488116.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 25102.09 Da Isoelectric Point: 8.7680
>NTDB_id=307057 DVV14_RS10290 WP_006958300.1 2248594..2249241(+) (qstR) [Vibrio coralliilyticus strain RE22]
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
Nucleotide
Download Length: 648 bp
>NTDB_id=307057 DVV14_RS10290 WP_006958300.1 2248594..2249241(+) (qstR) [Vibrio coralliilyticus strain RE22]
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAACTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTACTGTGCTTTGGCAATTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGATGTGGTGAGATAATCAACAGTCAAAACTGGCTGCCCCGCAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCATGTTGTGCTTAGCCAGACTGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCGTCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAACCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAACTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTACTGTGCTTTGGCAATTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGATGTGGTGAGATAATCAACAGTCAAAACTGGCTGCCCCGCAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCATGTTGTGCTTAGCCAGACTGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCGTCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAACCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
59.813 |
99.535 |
0.595 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
56.682 |
100 |
0.572 |
| qstR | Vibrio campbellii strain DS40M4 |
57.209 |
100 |
0.572 |