Detailed information NTG0306505

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: DLE02_RS18035
• Genome accession: NZ_CP031383
• Coordinates: 3750882..3751364 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046413.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LUH 6011
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3745882..3756364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLE02_RS18000 (DLE02_03561)	-	3745989..3747023 (+)	1035	WP_046693070.1	lipase secretion chaperone	-
DLE02_RS18005 (DLE02_03562)	-	3747138..3748079 (+)	942	WP_098713316.1	triacylglycerol lipase	-
DLE02_RS18010 (DLE02_03563)	rplS	3748132..3748500 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
DLE02_RS18015 (DLE02_03564)	trmD	3748708..3749448 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
DLE02_RS18020 (DLE02_03565)	rimM	3749494..3750042 (-)	549	WP_005130741.1	ribosome maturation factor RimM	-
DLE02_RS18025 (DLE02_03566)	rpsP	3750062..3750313 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
DLE02_RS18030 (DLE02_03567)	pilE	3750460..3750885 (-)	426	WP_005130737.1	type IV pilin protein	Machinery gene
DLE02_RS18035 (DLE02_03568)	pilY2	3750882..3751364 (-)	483	WP_001046413.1	type IV pilin protein	Machinery gene
DLE02_RS18040 (DLE02_03569)	pilY1	3751377..3755231 (-)	3855	WP_023896142.1	PilC/PilY family type IV pilus protein	Machinery gene
DLE02_RS18045 (DLE02_03570)	pilX	3755243..3756061 (-)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17602.87 Da
• Isoelectric Point: 8.8351

>NTDB_id=306505 DLE02_RS18035 WP_001046413.1 3750882..3751364(-) (pilY2) [Acinetobacter baumannii strain LUH 6011]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTRGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=306505 DLE02_RS18035 WP_001046413.1 3750882..3751364(-) (pilY2) [Acinetobacter baumannii strain LUH 6011]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCAGAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCTGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-133)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	39.535	100	0.425