Detailed information NTG0030611

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SPCG_RS04960
• Genome accession: NC_010582
• Coordinates: 932391..933344 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae CGSP14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 927391..938344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPCG_RS04935	rpmG	928134..928283 (+)	150	WP_041170896.1	50S ribosomal protein L33	-
SPCG_RS04940 (SPCG_0949)	secG	928323..928556 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SPCG_RS04945 (SPCG_0950)	rnr	928658..931012 (+)	2355	WP_000654903.1	ribonuclease R	-
SPCG_RS04950 (SPCG_0951)	smpB	930975..931442 (+)	468	WP_001051747.1	SsrA-binding protein SmpB	-
SPCG_RS04955 (SPCG_0952)	tehB	931458..932318 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
SPCG_RS04960 (SPCG_0953)	coiA	932391..933344 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
SPCG_RS04965 (SPCG_0954)	pepF	933363..935165 (+)	1803	WP_000244118.1	oligoendopeptidase F	Regulator
SPCG_RS04970 (SPCG_0955)	-	935167..935880 (+)	714	WP_000230399.1	O-methyltransferase	-
SPCG_RS04975 (SPCG_0956)	prsA	935947..936888 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
SPCG_RS04980 (SPCG_0957)	-	937007..937348 (-)	342	Protein_949	transposase	-
SPCG_RS13020	-	937761..937856 (+)	96	Protein_950	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=30611 SPCG_RS04960 WP_000495900.1 932391..933344(+) (coiA) [Streptococcus pneumoniae CGSP14]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=30611 SPCG_RS04960 WP_000495900.1 932391..933344(+) (coiA) [Streptococcus pneumoniae CGSP14]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432