Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   DV175_RS08590 Genome accession   NZ_CP031324
Coordinates   1452059..1452670 (+) Length   203 a.a.
NCBI ID   WP_061837797.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M23347     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447059..1457670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS08570 - 1448896..1449483 (-) 588 WP_002242525.1 superoxide dismutase -
  DV175_RS08580 dnaB 1449646..1451052 (+) 1407 WP_061837796.1 replicative DNA helicase -
  DV175_RS08585 pilH 1451361..1452029 (+) 669 WP_061837795.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DV175_RS08590 pilV 1452059..1452670 (+) 612 WP_061837797.1 type IV pilus modification protein PilV Machinery gene
  DV175_RS08595 pilJ 1452667..1453605 (+) 939 WP_115437396.1 PilW family protein Machinery gene
  DV175_RS08600 pilK 1453584..1454177 (+) 594 WP_115437397.1 pilus assembly protein Machinery gene
  DV175_RS08605 pilX 1454182..1454655 (+) 474 WP_192881274.1 PilX family type IV pilin Machinery gene

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22094.99 Da        Isoelectric Point: 4.9935

>NTDB_id=305615 DV175_RS08590 WP_061837797.1 1452059..1452670(+) (pilV) [Neisseria meningitidis strain M23347]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSAVDGDFAVDAVKSKKDLAEAQLKRFSYELKNALPDAAAIYYAICKDSSGNAPTFSGNAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=305615 DV175_RS08590 WP_061837797.1 1452059..1452670(+) (pilV) [Neisseria meningitidis strain M23347]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCCATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGCTGTGGATGGCGATTTTGCGGTTGATGCCGTGAAAAGCAAGAA
GGATTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCTATTACG
CCATCTGCAAGGATTCGTCGGGTAACGCGCCGACATTCTCCGGCAATGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAGGTGAG
CGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

94.175

100

0.956
  pilI Neisseria gonorrhoeae MS11

85.222

100

0.852
  pilV Neisseria gonorrhoeae MS11

85.222

100

0.852

Multiple sequence alignment