Detailed information NTG0304456

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DV427_RS01025
• Genome accession: NZ_CP031240
• Coordinates: 223036..224157 (+)
• Length: 373 a.a.
• NCBI ID: WP_114891002.1
• Uniprot ID: -
• Organism: Haemophilus haemolyticus strain M19345
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 218036..229157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV427_RS01010	leuC	218286..219695 (-)	1410	WP_114890999.1	3-isopropylmalate dehydratase large subunit	-
DV427_RS01015	leuB	219784..220860 (-)	1077	WP_114891000.1	3-isopropylmalate dehydrogenase	-
DV427_RS01020	leuA	220945..222492 (-)	1548	WP_114891001.1	2-isopropylmalate synthase	-
DV427_RS01025	dprA	223036..224157 (+)	1122	WP_114891002.1	DNA-processing protein DprA	Machinery gene
DV427_RS01030	yaaA	224210..224986 (+)	777	WP_114891003.1	peroxide stress protein YaaA	-
DV427_RS01035	-	224979..225560 (+)	582	WP_114891004.1	hypothetical protein	-
DV427_RS01040	pfkA	225668..226633 (+)	966	WP_005633361.1	6-phosphofructokinase	-
DV427_RS01045	smpB	226879..227361 (+)	483	WP_005633362.1	SsrA-binding protein SmpB	-
DV427_RS01050	-	227413..228201 (-)	789	WP_114891005.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41833.07 Da
• Isoelectric Point: 5.6587

>NTDB_id=304456 DV427_RS01025 WP_114891002.1 223036..224157(+) (dprA) [Haemophilus haemolyticus strain M19345]
MQDITYTLLRLMQVPKLGGVGIDKILSNITLDELLNYDDIAFRQMGWGAIQIRRWFKPEAKFIEPALEWSQKEGNHLVNY
FSPFYPFLLKQIASFPPLLFVKGNLTALSQRQIAMVGSRYCTAYGEYWAKYFATELSLAGFTITSGLALGIDGHCHQAVV
DIQGQTIAVLGSGLEQIYPVKHRKLSELILQNNGTLVSEFLPNQAPIATNFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQSEFSQGCNRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIMSENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=304456 DV427_RS01025 WP_114891002.1 223036..224157(+) (dprA) [Haemophilus haemolyticus strain M19345]
ATGCAAGATATTACTTACACACTCCTCCGCCTAATGCAAGTTCCTAAACTTGGCGGAGTGGGCATTGATAAAATTTTATC
CAATATTACGCTAGACGAGTTGCTCAATTATGATGATATTGCTTTCCGACAAATGGGATGGGGCGCCATTCAAATTCGTC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCAGCGCTAGAGTGGTCACAAAAAGAGGGAAATCATTTGGTGAATTAT
TTTTCCCCTTTTTACCCCTTCCTATTGAAACAGATAGCGAGCTTTCCCCCTCTGCTATTTGTAAAAGGAAATTTGACCGC
ACTTTCACAACGTCAAATTGCTATGGTGGGAAGTCGCTACTGCACAGCTTATGGTGAATATTGGGCTAAATATTTTGCTA
CGGAACTTTCATTGGCTGGCTTTACGATTACCAGTGGACTCGCATTGGGAATAGATGGGCATTGCCATCAAGCAGTTGTT
GATATTCAAGGACAAACCATTGCAGTTTTAGGAAGCGGATTAGAACAAATTTATCCCGTAAAGCACCGAAAACTTTCAGA
ACTCATTTTGCAAAACAACGGTACATTAGTTTCTGAGTTTTTACCAAACCAAGCACCAATTGCGACAAACTTCCCTCGTC
GTAATAGGATTATTAGCGGGCTTTCGGTTGGGACATTAGTGGTTGAAGCCACGGAAAAAAGCGGTTCTCTGATTACCGCT
CGGTATGCATTGGAACAAAACCGAGAGGTTTTTGCTGTGCCAGGTAATATTCAAAGTGAATTTAGCCAAGGTTGTAATCG
TCTCATTAAACAAGGCGCAATGTTGGTAGAAAATGCAAAGGATATTTTGGAAACCCTCTACCAACATTCTATCCATAGCC
AAACTGAAATCGATTTTGACCAAATCGCAGTGCCTAATTACACGCCACCACCCGATCCTCGGCGATTGGTAGAAGCACCA
AGTCACCCGAAACTTTACTCTCGTATCGGTTACACTCCTGTGAGCATTGATGATTTAGCTGAAGAATTTAACCTGAGTGT
CGATGTTTTACTTGTTCAGTTGCTCGATCTTGAATTGCAAGATCTCATCATGAGTGAAAATGGACTATATAAACGCGTTT
AG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (311-367)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	93.834	100	0.938
dprA	Glaesserella parasuis strain SC1401	51.149	93.298	0.477
dprA	Vibrio campbellii strain DS40M4	43.478	98.66	0.429
dprA	Vibrio cholerae strain A1552	42.742	99.732	0.426
dprA	Legionella pneumophila strain ERS1305867	41.159	87.936	0.362