Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGCR1_RS12495 | Genome accession | NZ_CP030932 |
| Coordinates | 2555124..2555636 (+) | Length | 170 a.a. |
| NCBI ID | WP_010782258.1 | Uniprot ID | - |
| Organism | Enterococcus gilvus strain CR1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2550124..2560636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGCR1_RS12480 (EGCR1_12485) | gyrB | 2550126..2552075 (+) | 1950 | WP_010782260.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| EGCR1_RS12485 (EGCR1_12490) | gyrA | 2552138..2554594 (+) | 2457 | WP_240318431.1 | DNA gyrase subunit A | - |
| EGCR1_RS12490 (EGCR1_12495) | rpsF | 2554777..2555079 (+) | 303 | WP_010742561.1 | 30S ribosomal protein S6 | - |
| EGCR1_RS12495 (EGCR1_12500) | ssb | 2555124..2555636 (+) | 513 | WP_010782258.1 | single-stranded DNA-binding protein | Machinery gene |
| EGCR1_RS12500 (EGCR1_12505) | rpsR | 2555660..2555893 (+) | 234 | WP_010742563.1 | 30S ribosomal protein S18 | - |
| EGCR1_RS12505 (EGCR1_12510) | - | 2556076..2558040 (+) | 1965 | WP_114525181.1 | DHH family phosphoesterase | - |
| EGCR1_RS12510 (EGCR1_12515) | rplI | 2558037..2558489 (+) | 453 | WP_114525182.1 | 50S ribosomal protein L9 | - |
| EGCR1_RS12515 (EGCR1_12520) | dnaB | 2558619..2559980 (+) | 1362 | WP_010782255.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19017.57 Da Isoelectric Point: 4.5909
>NTDB_id=302533 EGCR1_RS12495 WP_010782258.1 2555124..2555636(+) (ssb) [Enterococcus gilvus strain CR1]
MINNVVLVGRLTKDPDLRYTANGTGVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVAENFQLLESRNASEQRQQNPSNSNDNFQGGSNNFNNNNYDQSSQSAKNTMPDFDRDSDPFSGSS
IDISDDDLPF
MINNVVLVGRLTKDPDLRYTANGTGVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVAENFQLLESRNASEQRQQNPSNSNDNFQGGSNNFNNNNYDQSSQSAKNTMPDFDRDSDPFSGSS
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=302533 EGCR1_RS12495 WP_010782258.1 2555124..2555636(+) (ssb) [Enterococcus gilvus strain CR1]
TTGATTAATAATGTTGTATTAGTTGGTCGTTTAACAAAGGATCCTGATTTACGCTATACAGCAAATGGTACTGGAGTTGC
AACGTTTACCTTAGCGGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAAGCGGACTTTATCAATTGTGTGATCT
GGCGGAAATCTGCTGAAACTTTAGCTAATTACGCGCGTAAAGGAACTCTTTTAGGGGTTACGGGACGCATCCAAACAAGA
AATTATGAAAATCAGCAAGGACAACGTGTCTATGTGACTGAGGTTGTTGCTGAAAACTTCCAATTATTGGAATCTCGCAA
TGCGAGTGAACAACGTCAACAGAATCCAAGCAATTCTAATGACAATTTCCAAGGCGGGTCAAATAATTTTAACAACAACA
ACTATGATCAATCCTCTCAGTCAGCTAAGAACACTATGCCTGACTTCGATCGAGATTCAGATCCATTCAGTGGGTCCTCA
ATCGACATTTCAGATGATGATTTACCATTCTAA
TTGATTAATAATGTTGTATTAGTTGGTCGTTTAACAAAGGATCCTGATTTACGCTATACAGCAAATGGTACTGGAGTTGC
AACGTTTACCTTAGCGGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAAGCGGACTTTATCAATTGTGTGATCT
GGCGGAAATCTGCTGAAACTTTAGCTAATTACGCGCGTAAAGGAACTCTTTTAGGGGTTACGGGACGCATCCAAACAAGA
AATTATGAAAATCAGCAAGGACAACGTGTCTATGTGACTGAGGTTGTTGCTGAAAACTTCCAATTATTGGAATCTCGCAA
TGCGAGTGAACAACGTCAACAGAATCCAAGCAATTCTAATGACAATTTCCAAGGCGGGTCAAATAATTTTAACAACAACA
ACTATGATCAATCCTCTCAGTCAGCTAAGAACACTATGCCTGACTTCGATCGAGATTCAGATCCATTCAGTGGGTCCTCA
ATCGACATTTCAGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.335 |
100 |
0.635 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.977 |
100 |
0.576 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.377 |
62.353 |
0.376 |