Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | DS746_RS05855 | Genome accession | NZ_CP030888 |
| Coordinates | 1109848..1110150 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain CS19 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1104848..1115150
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DS746_RS05830 (DS746_1143) | rpsR | 1105211..1105471 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| DS746_RS05835 (DS746_1144) | lon | 1105531..1107906 (-) | 2376 | WP_002921392.1 | endopeptidase La | - |
| DS746_RS05840 (DS746_1145) | bamD | 1107923..1108570 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| DS746_RS05845 (DS746_1146) | fliW | 1108731..1109120 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| DS746_RS05850 (DS746_1147) | proC | 1109120..1109851 (+) | 732 | WP_002921390.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| DS746_RS05855 (DS746_1148) | ctsT | 1109848..1110150 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| DS746_RS05860 (DS746_1149) | - | 1110147..1110809 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| DS746_RS05865 (DS746_1150) | - | 1110806..1111258 (+) | 453 | WP_002921385.1 | hypothetical protein | - |
| DS746_RS05870 (DS746_1151) | hemD | 1111255..1111884 (-) | 630 | WP_002921384.1 | uroporphyrinogen-III synthase | - |
| DS746_RS05875 (DS746_1152) | thiE | 1111862..1112494 (-) | 633 | WP_002921383.1 | thiamine phosphate synthase | - |
| DS746_RS05880 (DS746_1153) | thiD | 1112484..1113296 (-) | 813 | WP_002921381.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DS746_RS05885 (DS746_1154) | - | 1113293..1113979 (-) | 687 | WP_052775526.1 | 3-methyladenine DNA glycosylase | - |
| DS746_RS05890 (DS746_1155) | - | 1113976..1114736 (-) | 761 | Protein_1140 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=302084 DS746_RS05855 WP_002855822.1 1109848..1110150(+) (ctsT) [Campylobacter jejuni strain CS19]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=302084 DS746_RS05855 WP_002855822.1 1109848..1110150(+) (ctsT) [Campylobacter jejuni strain CS19]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |