Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ETT61_RS03610 Genome accession   NZ_CP035438
Coordinates   643355..645598 (+) Length   747 a.a.
NCBI ID   WP_136020465.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 638355..650598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS03585 (ETT61_03575) - 638586..640586 (+) 2001 WP_136020462.1 potassium transporter Kup -
  ETT61_RS03590 (ETT61_03580) - 640610..640888 (-) 279 WP_002989164.1 GIY-YIG nuclease family protein -
  ETT61_RS03595 (ETT61_03585) - 640878..641654 (-) 777 WP_136020463.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ETT61_RS03600 (ETT61_03590) - 641772..642512 (+) 741 WP_168389648.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  ETT61_RS03605 (ETT61_03595) - 642712..643374 (+) 663 WP_002983967.1 ComEA family DNA-binding protein -
  ETT61_RS03610 (ETT61_03600) comEC/celB 643355..645598 (+) 2244 WP_136020465.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ETT61_RS03615 (ETT61_03605) holA 645669..646709 (+) 1041 WP_011888795.1 DNA polymerase III subunit delta -
  ETT61_RS03620 (ETT61_03610) sodA 646806..647411 (+) 606 WP_023612500.1 superoxide dismutase SodA -
  ETT61_RS03625 (ETT61_03615) - 647578..647805 (+) 228 WP_011054657.1 hypothetical protein -
  ETT61_RS10545 (ETT61_03625) - 647754..648612 (+) 859 Protein_655 serine hydrolase -
  ETT61_RS03640 (ETT61_03630) - 648726..649946 (-) 1221 WP_136020466.1 DUF3114 domain-containing protein -

Sequence


Protein


Download         Length: 747 a.a.        Molecular weight: 85528.54 Da        Isoelectric Point: 9.7989

>NTDB_id=301926 ETT61_RS03610 WP_136020465.1 643355..645598(+) (comEC/celB) [Streptococcus pyogenes strain emm22.8]
MTFSWTKLVPLSKIQFAFLILVLFYQIHSPSWLTFLLSLSLICLLVKRLFKKEFLGVFAILSFCALFLLYQKQQLVQKLE
IQPVQITSVALVPDSIRINGDQLAVLGRHGKHSYQLFYRLKSQAEAQLFKKEHRWLVMHAKVTLEKAEEVRNFKGFNYQT
FLAYQGIYRIGKVEQIEQLEVISPKSICDYLSSLRRRAIVHCQQHFPRPMSHYLTGLLFGYLDKSFGEMTDYYSQLGIIH
LFALSGMQVGFFLTCFRRVLLLLAVPLEWIKWIELPFACFYAALTGYSISVIRSLVQSQLRHLGIKGLDNLACTFLLVFL
WDAHFLMTVGGVLTFSYAFLLTVVTVEELSGAKRQLVQALTISLGILPFLLFYFSSFHPMSMVLTALLSYLFDLFILPLL
CLVFCLSPLVTVSICNHLFILLEKVIQFLGNTFNSSLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS
VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQKTLIPYLKSRGIHTIDQLLVTHAD
TDHMGDIEVVAKAIRIKEILTSQGSLSHPSFVRRLRRLKCQVRVLAAGDQLPIMGSVLQVLYPWQLGDGKNNDSLVLYGR
LLNRTFLFTGDLEKEGENEIIKRYPQLRVDYLKAGHHGSNTSSSAAFLDHIQPKVAFISAGKNNRYQHPHRETLARLEDR
QITYYRTDTQGAIRLTGRISWHLETVR

Nucleotide


Download         Length: 2244 bp        

>NTDB_id=301926 ETT61_RS03610 WP_136020465.1 643355..645598(+) (comEC/celB) [Streptococcus pyogenes strain emm22.8]
ATGACATTTTCTTGGACTAAGCTAGTGCCCCTGTCAAAGATTCAATTTGCTTTTTTAATCTTGGTTCTCTTTTATCAAAT
CCATAGCCCTAGCTGGTTAACGTTTCTCCTTAGCCTTAGTTTGATTTGCTTACTTGTCAAGCGTTTGTTTAAAAAAGAAT
TTCTTGGTGTCTTTGCCATCCTTAGTTTCTGTGCTTTGTTTTTGCTGTATCAGAAACAGCAGTTGGTTCAAAAACTGGAA
ATTCAGCCAGTACAAATAACCTCTGTAGCATTAGTTCCTGATAGTATTCGGATTAATGGTGATCAATTAGCTGTTCTTGG
ACGTCACGGGAAACATTCTTATCAGTTATTTTACCGTTTGAAAAGCCAAGCAGAAGCCCAATTGTTCAAGAAAGAGCACC
GTTGGTTAGTGATGCACGCAAAAGTGACATTGGAAAAAGCTGAGGAAGTTCGAAATTTTAAAGGCTTTAATTATCAGACT
TTTTTGGCTTATCAAGGAATTTACAGGATAGGGAAGGTAGAGCAAATAGAACAGCTTGAAGTGATTTCACCCAAGTCAAT
ATGTGACTATTTGTCCTCTTTAAGACGGCGAGCCATTGTTCATTGCCAGCAGCATTTTCCAAGACCTATGTCTCACTACC
TGACGGGCCTCCTTTTTGGTTATTTAGATAAGTCGTTTGGTGAGATGACAGATTATTATAGTCAGTTGGGTATCATTCAT
CTCTTTGCTTTATCAGGGATGCAGGTTGGCTTCTTTCTTACTTGTTTTAGAAGAGTGTTGCTATTACTCGCAGTTCCTTT
GGAATGGATAAAATGGATAGAGCTTCCTTTTGCTTGCTTTTATGCTGCGTTGACAGGTTATAGTATTTCTGTTATTCGAA
GCCTCGTGCAGTCGCAGTTGCGTCATTTAGGAATAAAAGGATTAGACAATCTCGCTTGTACTTTTTTACTTGTCTTTTTA
TGGGATGCCCATTTCTTAATGACTGTTGGTGGCGTATTAACGTTTAGCTATGCTTTTTTGTTAACAGTGGTTACTGTTGA
AGAATTATCAGGAGCTAAAAGACAGTTGGTACAAGCCTTGACCATTTCCCTAGGAATATTACCATTTTTACTCTTTTATT
TTTCCAGTTTTCACCCAATGTCAATGGTCTTAACAGCTCTCTTGTCTTATCTCTTTGACCTTTTTATTTTGCCCCTTCTT
TGTCTGGTTTTTTGTCTATCCCCTTTGGTGACTGTCTCAATATGCAACCATCTTTTTATTTTATTAGAAAAAGTCATTCA
ATTTCTCGGAAATACTTTCAATAGTTCCCTTGTTTTTGGAAGCCCGACCAGTTGGCACTTGCTTATCTTGGTGATTAGCT
TCGCTATTTTTTATGATTATCGGCAGGTGCGACAACGAGTTATCACTTGCGGTTTGGTTATAGCGTTGACGCTTTTGTCT
GTCAAATATCCTTTGACCAATGAAGTGACCTTTATCGACATTGGCCAGGGAGATAGTATTTTGGTGAGGGAGTGGACAGG
GAAAAATCTCTTAATAGATGTAGGTGGGCGCCCTTTCTTTTCTTCAAAAGAGCACTGGCGACGAGGACATCACGTAGCTA
ATGCTCAGAAAACCTTAATTCCTTACTTAAAAAGTAGAGGTATTCACACAATTGACCAACTATTAGTAACTCACGCAGAT
ACTGATCATATGGGGGATATCGAAGTGGTTGCCAAAGCTATTCGGATAAAGGAGATTTTGACTAGTCAAGGCAGTTTAAG
CCATCCAAGCTTTGTTAGGCGGCTAAGGCGTTTAAAATGTCAAGTTAGGGTTTTAGCAGCTGGAGACCAGTTGCCTATTA
TGGGAAGTGTCTTACAGGTACTCTACCCTTGGCAGTTAGGGGACGGGAAAAATAACGATTCTTTGGTACTTTATGGCAGG
CTCTTAAATCGAACTTTTCTTTTCACAGGTGACTTGGAAAAAGAGGGGGAAAACGAGATCATAAAACGTTATCCTCAACT
AAGAGTAGATTATTTAAAAGCAGGTCACCATGGATCAAATACCTCTTCTAGTGCAGCTTTTTTAGACCATATTCAACCTA
AAGTGGCCTTTATTTCTGCTGGAAAAAACAACCGTTATCAGCATCCTCACAGAGAAACCTTAGCCCGTTTGGAAGACAGA
CAAATCACTTATTACCGAACGGATACGCAAGGAGCTATTCGTTTGACTGGTCGGATAAGCTGGCATCTTGAAACGGTCCG
TTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

46.185

100

0.462

  comEC/celB Streptococcus mitis NCTC 12261

45.979

99.866

0.459

  comEC/celB Streptococcus pneumoniae TIGR4

45.114

100

0.451

  comEC/celB Streptococcus pneumoniae Rx1

44.92

100

0.45

  comEC/celB Streptococcus pneumoniae D39

44.92

100

0.45

  comEC/celB Streptococcus pneumoniae R6

44.92

100

0.45

  comEC Lactococcus lactis subsp. cremoris KW2

40.805

99.732

0.407