Detailed information NTG0030175

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SPT_RS09750
• Genome accession: NC_012469
• Coordinates: 1843903..1844802 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae Taiwan19F-14
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1838903..1849802

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPT_RS09735 (SPT_1964)	rsmA	1839553..1840425 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
SPT_RS13135	-	1840676..1840969 (-)	294	Protein_1853	hypothetical protein	-
SPT_RS09740 (SPT_1967)	-	1840962..1841603 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
SPT_RS09745 (SPT_1968)	-	1841605..1843635 (-)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
SPT_RS09750 (SPT_1969)	comR	1843903..1844802 (-)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
SPT_RS09755 (SPT_1970)	rnmV	1844874..1845434 (-)	561	WP_000660013.1	ribonuclease M5	-
SPT_RS09760 (SPT_1971)	-	1845434..1846207 (-)	774	WP_000575650.1	TatD family hydrolase	-
SPT_RS09765 (SPT_1972)	-	1846512..1847483 (-)	972	Protein_1859	DUF1542 domain-containing protein	-
SPT_RS09770 (SPT_1973)	rpmH	1847689..1847823 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
SPT_RS09775 (SPT_1974)	-	1847968..1849182 (-)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
SPT_RS09780 (SPT_1975)	-	1849338..1849630 (-)	293	Protein_1862	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=30175 SPT_RS09750 WP_000904848.1 1843903..1844802(-) (comR) [Streptococcus pneumoniae Taiwan19F-14]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=30175 SPT_RS09750 WP_000904848.1 1843903..1844802(-) (comR) [Streptococcus pneumoniae Taiwan19F-14]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361