Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DRA66_RS07935 Genome accession   NZ_CP030825
Coordinates   1584118..1584813 (-) Length   231 a.a.
NCBI ID   WP_002215704.1    Uniprot ID   Q7DDR6
Organism   Neisseria meningitidis strain 12-208     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 1568698..1585643 1584118..1584813 within 0


Gene organization within MGE regions


Location: 1568698..1585643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DRA66_RS07850 (DRA66_09270) - 1570142..1570387 (-) 246 WP_002226028.1 hypothetical protein -
  DRA66_RS07855 (DRA66_09280) - 1570499..1570927 (+) 429 WP_002226027.1 CopD family protein -
  DRA66_RS07860 (DRA66_09285) - 1570939..1571415 (+) 477 WP_002226026.1 CYTH domain-containing protein -
  DRA66_RS07865 (DRA66_09290) - 1571765..1572253 (-) 489 WP_002235430.1 dihydrofolate reductase -
  DRA66_RS07870 (DRA66_09295) aroG 1572321..1573376 (-) 1056 WP_002235429.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  DRA66_RS07875 - 1573538..1573765 (-) 228 WP_153310284.1 hypothetical protein -
  DRA66_RS07885 (DRA66_09305) - 1574043..1574300 (+) 258 WP_002231679.1 membrane protein -
  DRA66_RS07890 (DRA66_09310) - 1574349..1574453 (-) 105 Protein_1520 IS1595 family transposase -
  DRA66_RS11135 (DRA66_09315) - 1574557..1574763 (-) 207 WP_002220254.1 hypothetical protein -
  DRA66_RS07895 (DRA66_09325) comE 1575128..1575592 (-) 465 WP_025463168.1 ComEA family DNA-binding protein Machinery gene
  DRA66_RS07925 (DRA66_09365) - 1581391..1582197 (-) 807 WP_002221447.1 inner membrane protein YpjD -
  DRA66_RS07930 (DRA66_09370) ffh 1582417..1583787 (+) 1371 WP_002221448.1 signal recognition particle protein -
  DRA66_RS07935 (DRA66_09375) dsbA2 1584118..1584813 (-) 696 WP_002215704.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DRA66_RS07940 (DRA66_09380) - 1584984..1585643 (-) 660 WP_002218694.1 NYN domain-containing protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25419.90 Da        Isoelectric Point: 5.1502

>NTDB_id=301734 DRA66_RS07935 WP_002215704.1 1584118..1584813(-) (dsbA2) [Neisseria meningitidis strain 12-208]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=301734 DRA66_RS07935 WP_002215704.1 1584118..1584813(-) (dsbA2) [Neisseria meningitidis strain 12-208]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCTGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q7DDR6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

100

100

1

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment