Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DRA66_RS05520 | Genome accession | NZ_CP030825 |
| Coordinates | 1079357..1079881 (-) | Length | 174 a.a. |
| NCBI ID | WP_002212976.1 | Uniprot ID | P66849 |
| Organism | Neisseria meningitidis strain 12-208 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1074357..1084881
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DRA66_RS05510 (DRA66_06335) | fumC | 1076456..1077844 (+) | 1389 | WP_002219054.1 | class II fumarate hydratase | - |
| DRA66_RS05515 (DRA66_06340) | - | 1077909..1078832 (-) | 924 | WP_002240631.1 | DMT family transporter | - |
| DRA66_RS05520 (DRA66_06350) | ssb | 1079357..1079881 (-) | 525 | WP_002212976.1 | single-stranded DNA-binding protein | Machinery gene |
| DRA66_RS05525 (DRA66_06355) | - | 1079885..1081267 (-) | 1383 | WP_002240632.1 | MFS transporter | - |
| DRA66_RS05530 (DRA66_06360) | - | 1081378..1082001 (-) | 624 | WP_002212974.1 | lytic transglycosylase domain-containing protein | - |
| DRA66_RS05535 (DRA66_06365) | - | 1082061..1082300 (+) | 240 | WP_173026321.1 | hypothetical protein | - |
| DRA66_RS11060 | - | 1082691..1083109 (-) | 419 | Protein_1080 | hypothetical protein | - |
| DRA66_RS05550 (DRA66_06380) | - | 1083146..1083637 (-) | 492 | WP_002219860.1 | REP-associated tyrosine transposase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19452.65 Da Isoelectric Point: 5.8354
>NTDB_id=301723 DRA66_RS05520 WP_002212976.1 1079357..1079881(-) (ssb) [Neisseria meningitidis strain 12-208]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=301723 DRA66_RS05520 WP_002212976.1 1079357..1079881(-) (ssb) [Neisseria meningitidis strain 12-208]
ATGTCATTGAACAAAGTCATCCTCATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCGGT
TTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAACGTGTAGAGCGTACTGAGTGGCACAACA
TCACCATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAACGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGTGCGCCTTACGAGGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCGC
AGCAAAGCCGGCAGCCCGCCTCCGACGCGCCGTCCCATCCCCAAGAAGCACCAGCCGCGCCGCGCCGCCAACCCGTGCCT
GCCGCCGCCCCGGTCGAGGACATTGACGACGATATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTCATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCGGT
TTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAACGTGTAGAGCGTACTGAGTGGCACAACA
TCACCATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAACGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGTGCGCCTTACGAGGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCGC
AGCAAAGCCGGCAGCCCGCCTCCGACGCGCCGTCCCATCCCCAAGAAGCACCAGCCGCGCCGCGCCGCCAACCCGTGCCT
GCCGCCGCCCCGGTCGAGGACATTGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria meningitidis MC58 |
100 |
100 |
1 |
| ssb | Neisseria gonorrhoeae MS11 |
98.851 |
100 |
0.989 |
| ssb | Vibrio cholerae strain A1552 |
47.778 |
100 |
0.494 |
| ssb | Glaesserella parasuis strain SC1401 |
43.956 |
100 |
0.46 |