Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DPR03_RS03365 Genome accession   NZ_CP030754
Coordinates   698385..698768 (+) Length   127 a.a.
NCBI ID   WP_004814763.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain H3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 693385..703768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DPR03_RS03355 - 696233..697366 (-) 1134 WP_071321156.1 efflux RND transporter periplasmic adaptor subunit -
  DPR03_RS03360 - 697418..698077 (-) 660 WP_071321157.1 hypothetical protein -
  DPR03_RS03365 pilG 698385..698768 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  DPR03_RS03370 - 698799..699167 (+) 369 WP_004814764.1 response regulator -
  DPR03_RS03375 - 699173..699709 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  DPR03_RS03380 - 699755..701824 (+) 2070 WP_071321158.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14201.30 Da        Isoelectric Point: 4.7172

>NTDB_id=301321 DPR03_RS03365 WP_004814763.1 698385..698768(+) (pilG) [Acinetobacter schindleri strain H3]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=301321 DPR03_RS03365 WP_004814763.1 698385..698768(+) (pilG) [Acinetobacter schindleri strain H3]
ATGGACGATAAATTCCAAAATCTAAAAGTGATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCAGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTCATTACCGCAGTAGACGGTTTTGAAGCATTGTCAAAAATTGCAGAAGCAAATCCCGACA
TCGTTTTTGTAGATATCATGATGCCTCGCCTTGATGGGTATCAGACTTGTGCCTTAATTAAAAACTCGCAAAGTTATCAG
AACATTCCTGTTATTATGCTATCGAGTAAAGATGGTTTGTTCGATCAGGCCAAAGGCCGTGTGGTAGGTTCAGATGAATA
TCTCACCAAGCCATTTAGCAAAGATGAGTTGCTTACCGCAATCCGCAACCATATCAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment