Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ETA15_RS08445 Genome accession   NZ_CP035403
Coordinates   1581743..1582318 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis strain SRCM103581     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1576743..1587318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS08415 (ETA15_08415) dapD 1576929..1577639 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ETA15_RS08420 (ETA15_08420) dapI 1577709..1578833 (+) 1125 WP_017697280.1 N-acetyldiaminopimelate deacetylase -
  ETA15_RS08425 (ETA15_08425) ykuS 1578895..1579140 (+) 246 WP_003232382.1 YkuS family protein -
  ETA15_RS08430 (ETA15_08430) mscT 1579177..1579980 (-) 804 WP_017697281.1 small-conductance mechanosensitive channel protein MscT -
  ETA15_RS08435 (ETA15_08435) ahpA 1580217..1580759 (+) 543 WP_017697282.1 biofilm-specific peroxidase AhpA -
  ETA15_RS08440 (ETA15_08440) ykuV 1580831..1581277 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  ETA15_RS08445 (ETA15_08445) rok 1581743..1582318 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ETA15_RS08450 (ETA15_08450) - 1582439..1583589 (+) 1151 WP_087614160.1 IS3 family transposase -
  ETA15_RS08455 (ETA15_08455) cse15 1583649..1584614 (-) 966 WP_017696812.1 spore protein Cse15 -
  ETA15_RS08460 (ETA15_08460) mobA 1584751..1585350 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ETA15_RS08465 (ETA15_08465) moeB 1585401..1586420 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=299775 ETA15_RS08445 WP_003232378.1 1581743..1582318(+) (rok) [Bacillus subtilis strain SRCM103581]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=299775 ETA15_RS08445 WP_003232378.1 1581743..1582318(+) (rok) [Bacillus subtilis strain SRCM103581]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment