Detailed information NTG0299001

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: DN067_RS13720
• Genome accession: NZ_CP030083
• Coordinates: 2869830..2869931 (-)
• Length: 33 a.a.
• NCBI ID: WP_168713084.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Aba
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2864830..2874931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DN067_RS13710	-	2867146..2868351 (-)	1206	WP_002000389.1	hypothetical protein	-
DN067_RS13715	-	2868354..2869400 (-)	1047	WP_000027064.1	nucleoid-associated protein	-
DN067_RS13720	ssb	2869830..2869931 (-)	102	WP_168713084.1	single-stranded DNA-binding protein	Machinery gene
DN067_RS13725	-	2869913..2871355 (-)	1443	WP_000003535.1	hypothetical protein	-
DN067_RS19120	-	2871578..2871694 (-)	117	WP_001992235.1	single-stranded DNA-binding protein	-
DN067_RS13735	-	2872028..2874493 (-)	2466	WP_001022397.1	DUF927 domain-containing protein	-
DN067_RS13740	-	2874506..2874784 (-)	279	WP_001064707.1	hypothetical protein	-

Sequence

Protein

• Length: 33 a.a.
• Molecular weight: 3621.22 Da
• Isoelectric Point: 9.7265

>NTDB_id=299001 DN067_RS13720 WP_168713084.1 2869830..2869931(-) (ssb) [Acinetobacter baumannii strain Aba]
MVSSQLAEISSKYLKKGGKVYVEGSLCTGKWKD

Nucleotide

• Length: 102 bp

>NTDB_id=299001 DN067_RS13720 WP_168713084.1 2869830..2869931(-) (ssb) [Acinetobacter baumannii strain Aba]
TTGGTTAGTTCCCAATTAGCCGAGATTTCCAGTAAGTACCTTAAGAAAGGTGGCAAGGTTTATGTTGAGGGTTCATTGTG
TACTGGGAAGTGGAAAGACTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-33)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Glaesserella parasuis strain SC1401	62.963	81.818	0.515
ssb	Vibrio cholerae strain A1552	55.172	87.879	0.485
ssb	Neisseria gonorrhoeae MS11	53.571	84.848	0.455
ssb	Neisseria meningitidis MC58	53.571	84.848	0.455