Detailed information NTG0298413

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DK876_RS00780
• Genome accession: NZ_CP030022
• Coordinates: 122742..123176 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2714
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117742..128176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK876_RS00745 (DK876_00795)	-	118491..118856 (+)	366	WP_002936568.1	DUF1033 family protein	-
DK876_RS00750 (DK876_00800)	-	118891..119834 (-)	944	Protein_115	S66 peptidase family protein	-
DK876_RS00755 (DK876_00805)	comYA	119920..120870 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
DK876_RS00760 (DK876_00810)	comYB	120782..121819 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
DK876_RS00765 (DK876_00815)	comYC	121821..122102 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
DK876_RS00770 (DK876_00820)	comGD	122083..122490 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
DK876_RS00775 (DK876_00825)	comYE	122462..122755 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
DK876_RS00780 (DK876_00830)	comGF/cglF	122742..123176 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
DK876_RS00785 (DK876_00835)	comGG	123154..123564 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
DK876_RS00790 (DK876_00840)	comYH	123621..124574 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
DK876_RS00795 (DK876_00845)	-	124624..125811 (+)	1188	WP_012775422.1	acetate kinase	-
DK876_RS00800 (DK876_00850)	-	126126..126677 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
DK876_RS00805 (DK876_00855)	-	126733..127989 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=298413 DK876_RS00780 WP_011922561.1 122742..123176(+) (comGF/cglF) [Streptococcus suis strain ISU2714]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=298413 DK876_RS00780 WP_011922561.1 122742..123176(+) (comGF/cglF) [Streptococcus suis strain ISU2714]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444