Detailed information NTG0298283

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: A7J09_RS10840
• Genome accession: NZ_CP030015
• Coordinates: 2270321..2270755 (-)
• Length: 144 a.a.
• NCBI ID: WP_029753051.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2812
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2265321..2275755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7J09_RS10815 (A7J09_11050)	-	2265392..2266648 (-)	1257	WP_024394707.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
A7J09_RS10820 (A7J09_11055)	-	2266702..2267253 (-)	552	WP_029178522.1	folate family ECF transporter S component	-
A7J09_RS10825 (A7J09_11060)	-	2267568..2268755 (-)	1188	WP_029174724.1	acetate kinase	-
A7J09_RS10830 (A7J09_11065)	comYH	2268806..2269759 (-)	954	WP_029178523.1	class I SAM-dependent methyltransferase	Machinery gene
A7J09_RS10835 (A7J09_11070)	comGG	2269816..2270343 (-)	528	WP_029178524.1	competence type IV pilus minor pilin ComGG	-
A7J09_RS10840 (A7J09_11075)	comGF/cglF	2270321..2270755 (-)	435	WP_029753051.1	competence type IV pilus minor pilin ComGF	Machinery gene
A7J09_RS10845 (A7J09_11080)	comYE	2270742..2271035 (-)	294	WP_024394703.1	competence type IV pilus minor pilin ComGE	Machinery gene
A7J09_RS10850 (A7J09_11085)	comGD	2271007..2271414 (-)	408	WP_024394702.1	competence type IV pilus minor pilin ComGD	-
A7J09_RS10855 (A7J09_11090)	comYC	2271395..2271676 (-)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
A7J09_RS10860 (A7J09_11095)	comYB	2271678..2272715 (-)	1038	WP_043032925.1	competence type IV pilus assembly protein ComGB	Machinery gene
A7J09_RS10865 (A7J09_11100)	comYA	2272627..2273577 (-)	951	WP_014637312.1	competence type IV pilus ATPase ComGA	Machinery gene
A7J09_RS10870 (A7J09_11105)	-	2273663..2274613 (+)	951	WP_024394700.1	S66 family peptidase	-
A7J09_RS10875 (A7J09_11110)	-	2274648..2275013 (-)	366	WP_002936568.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16481.82 Da
• Isoelectric Point: 8.8592

>NTDB_id=298283 A7J09_RS10840 WP_029753051.1 2270321..2270755(-) (comGF/cglF) [Streptococcus suis strain ISU2812]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQSVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSASISQENQLVRIDFSFKNGEERTFIHAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=298283 A7J09_RS10840 WP_029753051.1 2270321..2270755(-) (comGF/cglF) [Streptococcus suis strain ISU2812]
TTGTTAAAAAGTAAAATTCCCGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAGTTGTTGATTCAAGAAGCACATTACCAACGTCAATCTGTCCAAAAGGAGTGGCTGGTATTTT
CTAGTCAGTTGCGGTCAGAGTGGGACCGGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAGGGTGGT
CAGGCTTTGGCCTTTGGTAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGATAGCGCATCCATTTCCCAAGAAAACCAGCTGGTGCGTATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCCATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	56.028	97.917	0.549
comGF/cglF	Streptococcus pneumoniae Rx1	56.028	97.917	0.549
comGF/cglF	Streptococcus pneumoniae D39	56.028	97.917	0.549
comGF/cglF	Streptococcus pneumoniae R6	56.028	97.917	0.549
comGF/cglF	Streptococcus mitis NCTC 12261	56.716	93.056	0.528
comGF/cglF	Streptococcus mitis SK321	53.731	93.056	0.5
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444