Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | A7J09_RS10830 | Genome accession | NZ_CP030015 |
| Coordinates | 2268806..2269759 (-) | Length | 317 a.a. |
| NCBI ID | WP_029178523.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain ISU2812 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2263806..2274759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7J09_RS10805 (A7J09_11040) | - | 2263855..2264139 (-) | 285 | WP_012774909.1 | DUF4651 domain-containing protein | - |
| A7J09_RS10810 (A7J09_11045) | pepA | 2264286..2265347 (+) | 1062 | WP_024394708.1 | glutamyl aminopeptidase | - |
| A7J09_RS10815 (A7J09_11050) | - | 2265392..2266648 (-) | 1257 | WP_024394707.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| A7J09_RS10820 (A7J09_11055) | - | 2266702..2267253 (-) | 552 | WP_029178522.1 | folate family ECF transporter S component | - |
| A7J09_RS10825 (A7J09_11060) | - | 2267568..2268755 (-) | 1188 | WP_029174724.1 | acetate kinase | - |
| A7J09_RS10830 (A7J09_11065) | comYH | 2268806..2269759 (-) | 954 | WP_029178523.1 | class I SAM-dependent methyltransferase | Machinery gene |
| A7J09_RS10835 (A7J09_11070) | comGG | 2269816..2270343 (-) | 528 | WP_029178524.1 | competence type IV pilus minor pilin ComGG | - |
| A7J09_RS10840 (A7J09_11075) | comGF/cglF | 2270321..2270755 (-) | 435 | WP_029753051.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A7J09_RS10845 (A7J09_11080) | comYE | 2270742..2271035 (-) | 294 | WP_024394703.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| A7J09_RS10850 (A7J09_11085) | comGD | 2271007..2271414 (-) | 408 | WP_024394702.1 | competence type IV pilus minor pilin ComGD | - |
| A7J09_RS10855 (A7J09_11090) | comYC | 2271395..2271676 (-) | 282 | WP_011921720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A7J09_RS10860 (A7J09_11095) | comYB | 2271678..2272715 (-) | 1038 | WP_043032925.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A7J09_RS10865 (A7J09_11100) | comYA | 2272627..2273577 (-) | 951 | WP_014637312.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A7J09_RS10870 (A7J09_11105) | - | 2273663..2274613 (+) | 951 | WP_024394700.1 | S66 family peptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35805.90 Da Isoelectric Point: 4.4054
>NTDB_id=298282 A7J09_RS10830 WP_029178523.1 2268806..2269759(-) (comYH) [Streptococcus suis strain ISU2812]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=298282 A7J09_RS10830 WP_029178523.1 2268806..2269759(-) (comYH) [Streptococcus suis strain ISU2812]
ATGAATTTTGAGAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTACTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCAGCTAGTATGGCAGATGTTATGCAGGCGGAG
ATTTCATTTGCCCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTGCTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCTAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCGATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAGAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTACTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCAGCTAGTATGGCAGATGTTATGCAGGCGGAG
ATTTCATTTGCCCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTGCTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCTAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCGATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |
| comYH | Streptococcus mutans UA140 |
59.81 |
99.685 |
0.596 |