Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   A7J09_RS04095 Genome accession   NZ_CP030015
Coordinates   847050..847694 (-) Length   214 a.a.
NCBI ID   WP_012027589.1    Uniprot ID   A0A0M9FEX3
Organism   Streptococcus suis strain ISU2812     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 842050..852694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS04080 (A7J09_04155) trpB 843428..844603 (+) 1176 WP_029178705.1 tryptophan synthase subunit beta -
  A7J09_RS04085 (A7J09_04160) nadE 844645..845469 (-) 825 WP_029178704.1 ammonia-dependent NAD(+) synthetase -
  A7J09_RS04090 (A7J09_04165) - 845482..846942 (-) 1461 WP_014638479.1 nicotinate phosphoribosyltransferase -
  A7J09_RS04095 (A7J09_04170) cclA/cilC 847050..847694 (-) 645 WP_012027589.1 prepilin peptidase Machinery gene
  A7J09_RS04100 (A7J09_04175) - 847816..848370 (+) 555 WP_004194627.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  A7J09_RS04105 (A7J09_04180) - 848386..849165 (-) 780 WP_029178703.1 ABC transporter ATP-binding protein -
  A7J09_RS04110 (A7J09_04185) - 849298..850635 (+) 1338 WP_029178702.1 hemolysin family protein -
  A7J09_RS04115 (A7J09_04190) pflA 850752..851543 (+) 792 WP_029178701.1 pyruvate formate-lyase-activating protein -
  A7J09_RS04120 (A7J09_04195) - 851590..852672 (+) 1083 WP_029178700.1 glycoside hydrolase family 3 protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24215.33 Da        Isoelectric Point: 8.4760

>NTDB_id=298258 A7J09_RS04095 WP_012027589.1 847050..847694(-) (cclA/cilC) [Streptococcus suis strain ISU2812]
MKTIILFFLGASIGSFLGLVIDRFPEQSIIAPSSHCNACKRRLKAWDLIPVLSQLSTKSKCRYCKAKIPYWYLGLEFLAG
LVVLLCHFQVLNLTETILILAGLVLTIYDIKHQEYPFAVWLIFTFIALILSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCT

Nucleotide


Download         Length: 645 bp        

>NTDB_id=298258 A7J09_RS04095 WP_012027589.1 847050..847694(-) (cclA/cilC) [Streptococcus suis strain ISU2812]
ATGAAGACAATTATCCTATTTTTCCTTGGAGCTTCTATCGGCTCCTTCTTGGGATTGGTCATCGACCGTTTCCCTGAACA
GTCCATTATCGCCCCCTCTAGTCACTGCAATGCCTGCAAACGACGGCTCAAGGCCTGGGACTTAATTCCAGTCCTATCCC
AGCTTTCGACAAAATCCAAATGCCGTTACTGCAAGGCGAAGATACCTTATTGGTATCTGGGATTGGAATTCTTAGCCGGT
CTAGTTGTCCTGCTCTGCCATTTTCAAGTCCTAAACCTAACCGAAACCATTCTCATCTTGGCAGGACTAGTTTTGACCAT
TTACGACATCAAGCATCAGGAATATCCTTTTGCTGTCTGGCTCATTTTTACTTTTATAGCTCTGATACTCTCCCAGCTCA
ACTGGCTTTTCTGTGGCTTTTTACTCTTGGCCTATCTGACTGAAAAATGGCAAATCAATATTGGTTCTGGTGACTTTCTC
TATCTGGCAAGTTTGGCCTTAATATGTGGATTTACAGAACTCCTCTGGATTATCCAGATTAGTTCCCTCCTAGGGCTTCT
TGTCTTCGCCATTTTCAAACCCAAGTCTATTCCCTACGTACCACTCCTATTTCTTTCAAGTATTCCTATCATTCTGTGCA
CCTAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M9FEX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

49.528

99.065

0.491
  cclA/cilC Streptococcus pneumoniae Rx1

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae D39

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae R6

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae TIGR4

47.17

99.065

0.467
  cclA/cilC Streptococcus mitis NCTC 12261

45.755

99.065

0.453

Multiple sequence alignment