Detailed information NTG0295689

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: EQH38_RS10320
• Genome accession: NZ_CP035242
• Coordinates: 2038559..2039557 (-)
• Length: 332 a.a.
• NCBI ID: WP_001810337.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901947
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2033559..2044557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH38_RS10300 (EQH38_10895)	eeP	2034924..2036183 (-)	1260	WP_000900669.1	RIP metalloprotease RseP	Regulator
EQH38_RS10305 (EQH38_10900)	-	2036205..2037008 (-)	804	WP_000189857.1	phosphatidate cytidylyltransferase	-
EQH38_RS10310 (EQH38_10905)	-	2037017..2037775 (-)	759	WP_000466719.1	isoprenyl transferase	-
EQH38_RS10315 (EQH38_10910)	-	2038006..2038578 (-)	573	WP_001098905.1	nucleotidyltransferase family protein	-
EQH38_RS10320 (EQH38_10915)	ruvB	2038559..2039557 (-)	999	WP_001810337.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
EQH38_RS10325 (EQH38_10920)	-	2039691..2039783 (+)	93	WP_000970381.1	type I toxin-antitoxin system Fst family toxin	-
EQH38_RS10330 (EQH38_10925)	-	2040598..2041014 (-)	417	WP_061367418.1	GNAT family N-acetyltransferase	-
EQH38_RS10335 (EQH38_10930)	-	2041026..2041721 (-)	696	WP_001144909.1	GNAT family N-acetyltransferase	-
EQH38_RS10340 (EQH38_10935)	leuS	2041915..2044416 (-)	2502	WP_000011765.1	leucine--tRNA ligase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37306.76 Da
• Isoelectric Point: 4.5053

>NTDB_id=295689 EQH38_RS10320 WP_001810337.1 2038559..2039557(-) (ruvB) [Streptococcus pneumoniae strain TVO_1901947]
MSRILDNEMMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DIITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=295689 EQH38_RS10320 WP_001810337.1 2038559..2039557(-) (ruvB) [Streptococcus pneumoniae strain TVO_1901947]
ATGAGTAGAATTTTAGATAATGAGATGATGGGTGATGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTATTTACGTGA
ATATATTGGTCAGGATAAGGTTAAGGATCAGCTTCAGATCTTTATCGAAGCCGCTAAAATGCGGGATGAAGCACTGGATC
ATGTGCTCTTATTTGGCCCTCCAGGGCTTGGGAAAACAACCATGGCTTTTGTCATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACGTCTGGTCCTGTTATCGAAAAAGCGGGTGATTTGGTAGCGATTTTGAATGAGTTAGAGCCTGGAGATGTCCT
CTTTATTGACGAGATCCATCGTTTGCCAATGTCAGTGGAAGAGGTGCTTTATAGTGCTATGGAGGACTTCTACATAGATA
TTATGATTGGGGCTGGTGAGGGTAGTCGTAGTGTTCATTTGGAGTTACCACCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCACTACGGGCACGTTTTGGGATTACAGGCCATATGGAGTATTATGCCCATGCTGACTTGAC
AGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACTCATGAGGCAGCATCTGAGTTGGCCCTACGTAGTC
GTGGGACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATAATGGGGAATGGGGTAATTGAT
GATATTATTACCGATAAGGCTTTGACTATGCTGGATGTTGACCATGAAGGTTTGGACTATGTGGATCAAAAAATCCTTCG
TACCATGATTGAGATGTACAGTGGAGGACCTGTTGGTCTAGGAACTCTTTCTGTGAATATCGCCGAAGAGCGTGAGACAG
TTGAAGATATGTATGAGCCTTACTTGATTCAAAAAGGTTTTATCATGCGGACACGGTCTGGACGGGTGGCGACTGCTAAG
GCATATGAGCACTTAGGTTATGAATACAGTGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	99.699	100	0.997
ruvB	Streptococcus pneumoniae D39	99.699	100	0.997
ruvB	Streptococcus pneumoniae TIGR4	99.398	100	0.994
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47