Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CSB75_RS02100 | Genome accession | NZ_CP029675 |
| Coordinates | 411634..412137 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain AR_0219 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 407477..455941 | 411634..412137 | within | 0 |
Gene organization within MGE regions
Location: 407477..455941
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB75_RS02065 (CSB75_0359) | - | 407574..408419 (+) | 846 | WP_001557587.1 | ParB/RepB/Spo0J family partition protein | - |
| CSB75_RS02070 (CSB75_0360) | - | 408573..409454 (+) | 882 | WP_000373073.1 | mechanosensitive ion channel family protein | - |
| CSB75_RS02075 (CSB75_0361) | - | 409484..409687 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| CSB75_RS02080 (CSB75_0362) | ychF | 409699..410796 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| CSB75_RS02085 (CSB75_0363) | - | 410882..411073 (-) | 192 | WP_001052484.1 | hypothetical protein | - |
| CSB75_RS02095 (CSB75_0364) | rpsF | 411317..411613 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| CSB75_RS02100 (CSB75_0365) | ssbA | 411634..412137 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| CSB75_RS02105 (CSB75_0366) | rpsR | 412189..412431 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| CSB75_RS02110 (CSB75_0367) | - | 412708..413646 (-) | 939 | WP_001817700.1 | Abi family protein | - |
| CSB75_RS02115 | - | 413685..414398 (-) | 714 | Protein_368 | tyrosine-type recombinase/integrase | - |
| CSB75_RS02120 (CSB75_0369) | selX | 414604..415215 (+) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| CSB75_RS02125 (CSB75_0371) | - | 415584..415952 (+) | 369 | WP_000849163.1 | YxeA family protein | - |
| CSB75_RS02130 (CSB75_0372) | - | 416133..416705 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| CSB75_RS02135 (CSB75_0373) | - | 416842..417105 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| CSB75_RS02140 (CSB75_0374) | - | 417405..417656 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| CSB75_RS02145 | - | 417695..417904 (-) | 210 | WP_000211677.1 | hypothetical protein | - |
| CSB75_RS02150 (CSB75_0375) | - | 418082..418663 (+) | 582 | WP_000158375.1 | histidine phosphatase family protein | - |
| CSB75_RS02155 (CSB75_0376) | - | 418729..419112 (-) | 384 | WP_000868259.1 | hypothetical protein | - |
| CSB75_RS02160 (CSB75_0377) | - | 419382..420008 (-) | 627 | WP_000746679.1 | NDxxF motif lipoprotein | - |
| CSB75_RS02165 (CSB75_0378) | - | 420081..420299 (-) | 219 | Protein_378 | hypothetical protein | - |
| CSB75_RS02170 (CSB75_0379) | ahpF | 420452..421975 (-) | 1524 | WP_000930514.1 | alkyl hydroperoxide reductase subunit F | - |
| CSB75_RS02175 (CSB75_0380) | ahpC | 421991..422560 (-) | 570 | WP_000052781.1 | alkyl hydroperoxide reductase subunit C | - |
| CSB75_RS02180 (CSB75_0381) | nfsA | 423052..423807 (+) | 756 | WP_001287099.1 | oxygen-insensitive NADPH nitroreductase | - |
| CSB75_RS02185 (CSB75_0382) | - | 423887..425275 (-) | 1389 | WP_000991018.1 | L-cystine transporter | - |
| CSB75_RS02190 | - | 425360..425458 (+) | 99 | WP_001792089.1 | hypothetical protein | - |
| CSB75_RS02200 (CSB75_0383) | - | 426122..427439 (+) | 1318 | Protein_384 | ISL3-like element IS1181 family transposase | - |
| CSB75_RS15380 | - | 427442..427519 (+) | 78 | Protein_385 | hypothetical protein | - |
| CSB75_RS02205 (CSB75_0386) | - | 427771..428727 (-) | 957 | WP_000956137.1 | hypothetical protein | - |
| CSB75_RS02210 (CSB75_0387) | - | 428845..429507 (-) | 663 | WP_000394690.1 | hypothetical protein | - |
| CSB75_RS02215 (CSB75_0388) | - | 429650..430057 (-) | 408 | WP_000763767.1 | general stress protein | - |
| CSB75_RS02220 (CSB75_0389) | xpt | 430570..431148 (+) | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| CSB75_RS02225 (CSB75_0390) | pbuX | 431148..432416 (+) | 1269 | WP_000793018.1 | xanthine permease PbuX | - |
| CSB75_RS02230 (CSB75_0391) | guaB | 432454..433920 (+) | 1467 | WP_000264071.1 | IMP dehydrogenase | - |
| CSB75_RS02235 (CSB75_0392) | guaA | 433945..435486 (+) | 1542 | WP_000424963.1 | glutamine-hydrolyzing GMP synthase | - |
| CSB75_RS02240 (CSB75_0393) | - | 435554..436747 (-) | 1194 | WP_000237797.1 | site-specific integrase | - |
| CSB75_RS02245 (CSB75_0394) | - | 436774..436974 (-) | 201 | WP_000633907.1 | DUF3173 family protein | - |
| CSB75_RS02255 (CSB75_0395) | - | 437472..437702 (-) | 231 | WP_000845143.1 | helix-turn-helix domain-containing protein | - |
| CSB75_RS02260 (CSB75_0396) | - | 437699..438121 (-) | 423 | WP_000804879.1 | sigma-70 family RNA polymerase sigma factor | - |
| CSB75_RS02270 (CSB75_0397) | - | 438652..439005 (+) | 354 | WP_001227350.1 | helix-turn-helix domain-containing protein | - |
| CSB75_RS02275 | - | 439063..439229 (-) | 167 | Protein_398 | cysteine-rich KTR domain-containing protein | - |
| CSB75_RS02280 (CSB75_0398) | tet(M) | 439348..441267 (-) | 1920 | WP_000691737.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| CSB75_RS02285 | - | 441283..441399 (-) | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| CSB75_RS02295 (CSB75_0399) | - | 441644..442573 (-) | 930 | WP_000584387.1 | conjugal transfer protein | - |
| CSB75_RS02300 (CSB75_0400) | - | 442590..443612 (-) | 1023 | WP_000768373.1 | bifunctional lytic transglycosylase/C40 family peptidase | - |
| CSB75_RS02305 (CSB75_0401) | - | 443609..445636 (-) | 2028 | WP_000192393.1 | membrane protein | - |
| CSB75_RS02310 (CSB75_0402) | - | 445633..448086 (-) | 2454 | WP_000331165.1 | ATP-binding protein | - |
| CSB75_RS02315 (CSB75_0403) | - | 448070..448465 (-) | 396 | WP_000723887.1 | conjugal transfer protein | - |
| CSB75_RS02320 (CSB75_0404) | - | 448537..449175 (-) | 639 | WP_000248477.1 | DUF6037 family protein | - |
| CSB75_RS02325 (CSB75_0405) | - | 449231..449731 (-) | 501 | WP_000425404.1 | antirestriction protein ArdA | - |
| CSB75_RS02330 (CSB75_0406) | - | 449792..450571 (-) | 780 | WP_000675717.1 | abortive infection family protein | - |
| CSB75_RS02335 (CSB75_0407) | - | 450613..450834 (-) | 222 | WP_001009054.1 | hypothetical protein | - |
| CSB75_RS02340 | - | 450831..451121 (-) | 291 | WP_000055376.1 | hypothetical protein | - |
| CSB75_RS02345 (CSB75_0408) | mobT | 451118..452302 (-) | 1185 | WP_000426689.1 | MobT family relaxase | - |
| CSB75_RS02350 (CSB75_0409) | - | 452484..453887 (-) | 1404 | WP_001130244.1 | FtsK/SpoIIIE domain-containing protein | - |
| CSB75_RS02355 (CSB75_0411) | - | 453909..454682 (-) | 774 | WP_000185761.1 | hypothetical protein | - |
| CSB75_RS02360 (CSB75_0412) | - | 454692..455069 (-) | 378 | WP_001234191.1 | YdcP family protein | - |
| CSB75_RS02365 (CSB75_0413) | - | 455090..455404 (-) | 315 | WP_000421279.1 | YdcP family protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=295036 CSB75_RS02100 WP_000934799.1 411634..412137(+) (ssbA) [Staphylococcus aureus strain AR_0219]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=295036 CSB75_RS02100 WP_000934799.1 411634..412137(+) (ssbA) [Staphylococcus aureus strain AR_0219]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |