Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | DLK06_RS01790 | Genome accession | NZ_CP029610 |
| Coordinates | 372595..373077 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain ST220 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 367595..378077
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLK06_RS01780 (DLK06_01780) | pilX | 367909..368718 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| DLK06_RS01785 (DLK06_01785) | pilY1 | 368730..372584 (+) | 3855 | WP_032057269.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| DLK06_RS01790 (DLK06_01790) | pilY2 | 372595..373077 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| DLK06_RS01795 (DLK06_01795) | pilE | 373074..373499 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| DLK06_RS01800 (DLK06_01800) | rpsP | 373647..373898 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DLK06_RS01805 (DLK06_01805) | rimM | 373918..374466 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| DLK06_RS01810 (DLK06_01810) | trmD | 374509..375264 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DLK06_RS01815 (DLK06_01815) | rplS | 375484..375852 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| DLK06_RS01820 (DLK06_01820) | lip | 375904..376845 (-) | 942 | WP_080777126.1 | lipase family alpha/beta hydrolase | - |
| DLK06_RS01825 (DLK06_01825) | - | 376961..377992 (-) | 1032 | WP_032057272.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=294180 DLK06_RS01790 WP_002116770.1 372595..373077(+) (pilY2) [Acinetobacter pittii strain ST220]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=294180 DLK06_RS01790 WP_002116770.1 372595..373077(+) (pilY2) [Acinetobacter pittii strain ST220]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |