Detailed information NTG0293356

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: DKK66_RS07330
• Genome accession: NZ_CP029539
• Coordinates: 1550770..1552107 (-)
• Length: 445 a.a.
• NCBI ID: WP_131356708.1
• Uniprot ID: A0A4P6TH67
• Organism: Aquitalea sp. USM4
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1545770..1557107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKK66_RS07330 (DKK66_07340)	pilR	1550770..1552107 (-)	1338	WP_131356708.1	sigma-54 dependent transcriptional regulator	Regulator
DKK66_RS07335 (DKK66_07345)	-	1552100..1553656 (-)	1557	WP_242673584.1	nitrogen regulation protein NR(II)	-
DKK66_RS07340 (DKK66_07350)	parC	1553653..1555983 (-)	2331	WP_207389884.1	DNA topoisomerase IV subunit A	-
DKK66_RS07345 (DKK66_07355)	-	1556153..1556623 (+)	471	WP_131356714.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49275.60 Da
• Isoelectric Point: 5.0071

>NTDB_id=293356 DKK66_RS07330 WP_131356708.1 1550770..1552107(-) (pilR) [Aquitalea sp. USM4]
MNNAPLRVLVVDDEPDIRELLELTLIKMGLDVITAGNVSDAKARLQREPFNLVLTDMRMPDGEGIEVVEFIAEQGLDIPS
AIITAYGSTENAVKAMKAGAFDYLSKPISLAQLRTLVKSVLKVDGNGKSSSIERLVGDSPAMLEVRRMVDKLARSQAAVY
ISGESGTGKEQAARLIHEQSGRAERPFVPVNCGAIPENLMESEFFGYRKGAFTGADSERDGFFQQAAGGTLFLDEVADLP
LAMQVKLLRAIQEKKVRKLGSPQEDPVDVRIICATHKDLAALVEAGQFRQDLYYRLNVLPLRMPPLRELREDIPRFIGAL
LDRFATADSRPRLTPDAVKAMLAYNYPGNFRELENILERAVALAGDDKVDVADLQLTLSQPLQEQDEAIPGYAGSEPLQD
FLDRVEREAILKALDATRFNRTQAAKLLGLTFRSMRYRMDRLGIK

Nucleotide

• Length: 1338 bp

>NTDB_id=293356 DKK66_RS07330 WP_131356708.1 1550770..1552107(-) (pilR) [Aquitalea sp. USM4]
ATGAATAATGCCCCCCTGCGCGTACTGGTCGTGGACGACGAACCGGACATCCGCGAACTGCTGGAACTCACCCTGATCAA
GATGGGCCTGGACGTCATCACGGCCGGCAATGTCAGCGATGCCAAGGCGCGCCTGCAGCGCGAACCCTTCAATCTGGTGC
TTACCGACATGCGCATGCCGGATGGCGAAGGCATTGAAGTGGTCGAATTCATTGCCGAACAAGGACTGGACATCCCCAGC
GCCATCATCACCGCCTACGGCAGCACCGAAAACGCAGTCAAGGCCATGAAGGCCGGCGCGTTTGACTATCTGTCCAAACC
CATCAGCCTGGCCCAGTTGCGCACCCTGGTGAAATCGGTACTCAAAGTGGATGGCAATGGCAAATCCAGCAGTATCGAAC
GCCTGGTTGGCGACTCGCCTGCCATGCTGGAAGTCCGCCGCATGGTGGACAAGCTGGCGCGCAGTCAGGCCGCTGTCTAT
ATCAGTGGCGAATCGGGCACCGGCAAGGAGCAAGCCGCCCGCCTGATCCATGAACAAAGCGGACGCGCCGAACGCCCCTT
TGTTCCGGTCAACTGCGGTGCCATTCCGGAAAACCTGATGGAAAGCGAATTCTTTGGCTATCGCAAAGGTGCCTTCACCG
GTGCCGACAGCGAGCGCGACGGATTCTTCCAGCAAGCCGCCGGCGGCACCCTGTTTCTGGACGAAGTTGCCGACCTGCCG
CTAGCCATGCAAGTCAAACTGCTGCGCGCCATTCAGGAAAAGAAGGTGCGCAAACTGGGCAGCCCGCAAGAAGACCCGGT
TGATGTGCGCATCATCTGCGCCACCCACAAGGACCTGGCAGCCCTGGTCGAAGCCGGCCAGTTCCGTCAGGACCTGTACT
ACCGGCTCAATGTACTGCCGCTGCGCATGCCGCCACTGCGCGAACTGCGCGAGGACATTCCCCGCTTCATCGGCGCCCTG
CTCGACCGCTTCGCCACCGCCGACAGCCGACCGCGTCTCACCCCGGATGCGGTCAAGGCCATGCTGGCTTACAACTACCC
GGGCAACTTCCGTGAACTGGAAAACATCCTCGAACGCGCAGTAGCACTGGCCGGTGACGACAAGGTCGATGTCGCCGATC
TGCAACTCACCCTCAGCCAGCCACTGCAGGAACAGGATGAAGCCATCCCCGGCTATGCAGGCAGCGAACCGTTGCAAGAC
TTTCTGGACCGGGTGGAACGGGAAGCCATCCTCAAGGCACTGGATGCCACCCGCTTCAACCGCACCCAGGCGGCAAAGCT
GCTCGGCCTCACCTTCCGCTCCATGCGCTACCGGATGGACCGGCTCGGCATCAAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-441)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (8-117)

3D structure

• AlphaFold DB: A0A4P6TH67

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.597	99.326	0.582
pilR	Acinetobacter baumannii strain A118	42.795	100	0.44
luxO	Vibrio cholerae strain A1552	37.875	97.303	0.369