Detailed information NTG0029305

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BPUM_RS15895
• Genome accession: NC_009848
• Coordinates: 3171347..3172522 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus SAFR-032
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3166347..3177522

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPUM_RS15865 (BPUM_3193)	-	3166515..3166934 (-)	420	WP_012011429.1	TIGR03826 family flagellar region protein	-
BPUM_RS19225	comFC	3166991..3167677 (-)	687	WP_012011430.1	amidophosphoribosyltransferase	Machinery gene
BPUM_RS15875 (BPUM_3195)	-	3167674..3167967 (-)	294	WP_012011431.1	late competence development ComFB family protein	-
BPUM_RS15880 (BPUM_3196)	comFA	3168034..3169413 (-)	1380	WP_012011432.1	DEAD/DEAH box helicase	Machinery gene
BPUM_RS15885 (BPUM_3197)	-	3169533..3170375 (-)	843	WP_012011433.1	DegV family protein	-
BPUM_RS15890 (BPUM_3198)	degU	3170593..3171282 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BPUM_RS15895 (BPUM_3199)	degS	3171347..3172522 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
BPUM_RS15900 (BPUM_3200)	-	3172744..3173412 (+)	669	WP_012011434.1	YigZ family protein	-
BPUM_RS15905 (BPUM_3201)	-	3173397..3174488 (+)	1092	WP_012011435.1	LCP family protein	-
BPUM_RS15910 (BPUM_3202)	-	3174524..3175591 (-)	1068	WP_003212692.1	glycosyltransferase family 4 protein	-
BPUM_RS15915 (BPUM_3203)	tuaH	3175722..3176912 (-)	1191	WP_041816361.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=29305 BPUM_RS15895 WP_003213166.1 3171347..3172522(-) (degS) [Bacillus pumilus SAFR-032]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=29305 BPUM_RS15895 WP_003213166.1 3171347..3172522(-) (degS) [Bacillus pumilus SAFR-032]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGCGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGATGATCTAGAAAGACGATTGTTAAGCCTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTTGTTCTTAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAAGCAAAACAAGATTTTGGACTGAGAATTATTGAAGCCCAAGAAGAAGAACGTAAAAGGGTATCCCGTGA
AATTCATGATGGTCCGGCCCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGAGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTGAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGATGATGGAAAAGGTTTTGATATGAAAGATGTGAAAACAAATAAAAATAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATTGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841