Detailed information NTG0292682

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: DKE43_RS12335
• Genome accession: NZ_CP029464
• Coordinates: 2351177..2352352 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain ZB201701
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2346177..2357352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKE43_RS12305 (DKE43_12355)	-	2346344..2346763 (-)	420	WP_060597396.1	TIGR03826 family flagellar region protein	-
DKE43_RS18775	comFC	2346820..2347506 (-)	687	WP_189288297.1	ComF family protein	Machinery gene
DKE43_RS12315 (DKE43_12365)	-	2347503..2347796 (-)	294	WP_060597398.1	competence protein ComFB	-
DKE43_RS12320 (DKE43_12370)	comFA	2347863..2349242 (-)	1380	WP_276318041.1	DEAD/DEAH box helicase	Machinery gene
DKE43_RS12325 (DKE43_12375)	-	2349363..2350205 (-)	843	WP_034660152.1	DegV family protein	-
DKE43_RS12330 (DKE43_12380)	degU	2350423..2351112 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
DKE43_RS12335 (DKE43_12385)	degS	2351177..2352352 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
DKE43_RS12340 (DKE43_12390)	-	2352574..2353242 (+)	669	WP_012011434.1	YigZ family protein	-
DKE43_RS12345 (DKE43_12395)	-	2353227..2354318 (+)	1092	WP_060597401.1	LCP family protein	-
DKE43_RS12350 (DKE43_12400)	-	2354354..2355421 (-)	1068	WP_034660156.1	MraY family glycosyltransferase	-
DKE43_RS12355 (DKE43_12405)	-	2355556..2356752 (-)	1197	WP_066031804.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=292682 DKE43_RS12335 WP_003213166.1 2351177..2352352(-) (degS) [Bacillus pumilus strain ZB201701]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=292682 DKE43_RS12335 WP_003213166.1 2351177..2352352(-) (degS) [Bacillus pumilus strain ZB201701]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTCGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTACAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841