Detailed information NTG0292278

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DF184_RS06865
• Genome accession: NZ_CP029398
• Coordinates: 1373148..1374080 (-)
• Length: 310 a.a.
• NCBI ID: WP_024410961.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HN105
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1368148..1379080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DF184_RS06840 (DF184_06840)	-	1368786..1369505 (-)	720	WP_109372148.1	O-methyltransferase	-
DF184_RS06845 (DF184_06845)	-	1369580..1370128 (-)	549	WP_109371644.1	DUF6630 family protein	-
DF184_RS06850 (DF184_06850)	-	1370139..1370582 (-)	444	WP_109371646.1	hypothetical protein	-
DF184_RS06855 (DF184_06855)	pepF	1370584..1372386 (-)	1803	WP_024410963.1	oligoendopeptidase F	Regulator
DF184_RS06860 (DF184_06860)	-	1372459..1373094 (-)	636	WP_024410962.1	hypothetical protein	-
DF184_RS06865 (DF184_06865)	coiA	1373148..1374080 (-)	933	WP_024410961.1	competence protein CoiA family protein	Machinery gene
DF184_RS06870 (DF184_06870)	-	1374148..1374714 (+)	567	WP_024391871.1	GNAT family protein	-
DF184_RS06875 (DF184_06875)	metG	1374744..1376747 (-)	2004	WP_109371648.1	methionine--tRNA ligase	-
DF184_RS06880 (DF184_06880)	-	1376988..1377737 (-)	750	WP_109371650.1	hypothetical protein	-
DF184_RS06885 (DF184_06885)	-	1377821..1378702 (-)	882	WP_109371652.1	GIY-YIG nuclease family protein	-
DF184_RS06890 (DF184_06890)	-	1378692..1378982 (-)	291	WP_109371654.1	hypothetical protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 36188.85 Da
• Isoelectric Point: 8.9831

>NTDB_id=292278 DF184_RS06865 WP_024410961.1 1373148..1374080(-) (coiA) [Streptococcus suis strain HN105]
MLVALDEDRQIFNLLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCTYFSENESAQHLSLKSEIYSWLVEKEQ
VELEKCLPKIGQVADLLVNNGLALEVQCSSLPISRLQVRTKAYYDTGYQVVWLLGKDLWLKERLTNLHKQFLTFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHGLTKVFPFGQGNLLDILRLPFAKQTLSSMTCPMDEDLPRYIAQQLYYKSPKWL
ALQAEAYGRGENLLTKTAFDWYPHIRLPRSAIGFAQIRQDLTPIYQAFNQFYDKVENKRKQVLYPPKMYR

Nucleotide

• Length: 933 bp

>NTDB_id=292278 DF184_RS06865 WP_024410961.1 1373148..1374080(-) (coiA) [Streptococcus suis strain HN105]
ATGTTAGTTGCACTTGATGAAGACCGACAAATTTTTAATCTTTTGGAAAATCCTGCGCCACAAGGTCGCTATTCCTGTCC
AGGTTGTGGAGGCCTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCATTTTGCCCATGTCACCCTACGGGATTGCA
CATACTTTTCCGAGAATGAGTCTGCCCAGCACCTCTCCCTCAAATCAGAGATTTACAGCTGGCTTGTGGAAAAGGAGCAG
GTTGAACTTGAAAAATGCTTGCCAAAAATTGGCCAGGTCGCTGATTTATTGGTCAATAATGGTCTAGCCTTGGAAGTCCA
ATGTTCCAGTCTACCGATTTCTCGTTTGCAGGTGAGAACAAAAGCCTATTATGATACTGGTTATCAAGTTGTCTGGTTGC
TTGGTAAGGATTTATGGCTCAAGGAACGACTGACCAATTTGCACAAGCAATTTCTCACTTTTAGTATGAACATGGGCTTT
CATCTTTGGGAACTAGATGATGAGAAGAAAGAGTTAAGACTCCGTTACCTCATTCATGAAGATTTGCGAGGTAAGGTACA
CGGTCTTACGAAAGTCTTTCCCTTTGGTCAGGGAAACTTACTGGACATATTACGTTTACCTTTTGCCAAGCAAACCCTAT
CTAGCATGACTTGTCCAATGGATGAGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAAATGGCTC
GCCCTGCAAGCAGAGGCTTATGGACGTGGAGAAAATCTACTGACCAAGACAGCATTTGACTGGTATCCCCACATCCGTCT
ACCCCGCTCTGCTATTGGCTTTGCCCAAATTCGCCAAGACCTGACGCCGATTTACCAAGCTTTTAATCAGTTTTACGACA
AAGTGGAAAATAAGAGGAAACAAGTCTTGTATCCACCTAAAATGTATAGATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (22-234)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	52.09	100	0.523
coiA	Streptococcus pneumoniae TIGR4	50.804	100	0.51
coiA	Streptococcus pneumoniae Rx1	50.804	100	0.51
coiA	Streptococcus pneumoniae D39	50.804	100	0.51
coiA	Streptococcus pneumoniae R6	50.804	100	0.51
coiA	Lactococcus lactis subsp. cremoris KW2	41.875	100	0.432