Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DJ533_RS03780 | Genome accession | NZ_CP029397 |
| Coordinates | 299173..299700 (+) | Length | 175 a.a. |
| NCBI ID | WP_065993310.1 | Uniprot ID | A0A2S2FAF5 |
| Organism | Acinetobacter defluvii strain WCHA30 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 294173..304700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ533_RS03765 (DJ533_03775) | comM | 296701..297759 (+) | 1059 | WP_065993307.1 | pilus assembly protein PilM | Machinery gene |
| DJ533_RS03770 (DJ533_03780) | pilN | 297759..298391 (+) | 633 | WP_065993308.1 | PilN domain-containing protein | Machinery gene |
| DJ533_RS03775 (DJ533_03785) | pilO | 298388..299170 (+) | 783 | WP_065993309.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DJ533_RS03780 (DJ533_03790) | pilP | 299173..299700 (+) | 528 | WP_065993310.1 | pilus assembly protein PilP | Machinery gene |
| DJ533_RS03785 (DJ533_03795) | pilQ | 299766..301885 (+) | 2120 | Protein_241 | type IV pilus secretin PilQ | - |
| DJ533_RS03790 (DJ533_03800) | aroK | 301922..302464 (+) | 543 | WP_065993311.1 | shikimate kinase AroK | - |
| DJ533_RS03795 (DJ533_03805) | aroB | 302490..303569 (+) | 1080 | WP_065993312.1 | 3-dehydroquinate synthase | - |
| DJ533_RS03800 (DJ533_03810) | - | 303582..304472 (+) | 891 | WP_065993313.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19317.31 Da Isoelectric Point: 8.8539
>NTDB_id=292213 DJ533_RS03780 WP_065993310.1 299173..299700(+) (pilP) [Acinetobacter defluvii strain WCHA30]
MNLFKLMSGISLAALLVGCDSRIDAVNQQMAAIRSQPPLPIEPAPTFDPVPSFNYSAQQLRSPFLPSSLANELKIMSGKR
VYPNFSRQPQPLESYALETLSFKGSMKSNNGKIVGLIQTPDKEVERVQTGNYLGMNQGRIISITPTRIDLLEIVPDGRDG
YIERPRSLVLIGQLD
MNLFKLMSGISLAALLVGCDSRIDAVNQQMAAIRSQPPLPIEPAPTFDPVPSFNYSAQQLRSPFLPSSLANELKIMSGKR
VYPNFSRQPQPLESYALETLSFKGSMKSNNGKIVGLIQTPDKEVERVQTGNYLGMNQGRIISITPTRIDLLEIVPDGRDG
YIERPRSLVLIGQLD
Nucleotide
Download Length: 528 bp
>NTDB_id=292213 DJ533_RS03780 WP_065993310.1 299173..299700(+) (pilP) [Acinetobacter defluvii strain WCHA30]
ATGAATTTATTTAAGTTAATGAGCGGAATTTCTCTTGCTGCTTTATTGGTTGGATGTGATTCCAGAATTGATGCAGTCAA
TCAGCAAATGGCAGCGATTCGTAGTCAGCCACCTTTACCGATTGAGCCTGCACCAACATTTGATCCTGTGCCAAGTTTTA
ATTATTCCGCACAGCAATTGCGTAGCCCATTTTTACCAAGTTCATTGGCCAATGAGCTAAAAATTATGTCTGGGAAACGT
GTTTATCCAAACTTCTCACGACAGCCTCAGCCTTTAGAAAGTTATGCGCTTGAAACTTTGAGTTTTAAAGGCAGTATGAA
ATCAAATAATGGGAAAATTGTTGGTCTGATTCAGACACCAGATAAAGAAGTGGAACGTGTGCAAACAGGAAACTATTTGG
GAATGAATCAGGGGCGAATTATTTCAATCACTCCAACCCGAATTGATCTGTTAGAGATCGTACCAGATGGGCGAGACGGT
TATATCGAAAGACCACGAAGTCTAGTATTGATCGGTCAATTAGATTGA
ATGAATTTATTTAAGTTAATGAGCGGAATTTCTCTTGCTGCTTTATTGGTTGGATGTGATTCCAGAATTGATGCAGTCAA
TCAGCAAATGGCAGCGATTCGTAGTCAGCCACCTTTACCGATTGAGCCTGCACCAACATTTGATCCTGTGCCAAGTTTTA
ATTATTCCGCACAGCAATTGCGTAGCCCATTTTTACCAAGTTCATTGGCCAATGAGCTAAAAATTATGTCTGGGAAACGT
GTTTATCCAAACTTCTCACGACAGCCTCAGCCTTTAGAAAGTTATGCGCTTGAAACTTTGAGTTTTAAAGGCAGTATGAA
ATCAAATAATGGGAAAATTGTTGGTCTGATTCAGACACCAGATAAAGAAGTGGAACGTGTGCAAACAGGAAACTATTTGG
GAATGAATCAGGGGCGAATTATTTCAATCACTCCAACCCGAATTGATCTGTTAGAGATCGTACCAGATGGGCGAGACGGT
TATATCGAAAGACCACGAAGTCTAGTATTGATCGGTCAATTAGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
72.093 |
98.286 |
0.709 |
| comL | Acinetobacter baylyi ADP1 |
77.07 |
89.714 |
0.691 |