Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DJ533_RS03770 | Genome accession | NZ_CP029397 |
| Coordinates | 297759..298391 (+) | Length | 210 a.a. |
| NCBI ID | WP_065993308.1 | Uniprot ID | A0A2S2F9W9 |
| Organism | Acinetobacter defluvii strain WCHA30 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 292759..303391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ533_RS03760 (DJ533_03770) | ponA | 293959..296538 (-) | 2580 | WP_065993306.1 | penicillin-binding protein PBP1a | - |
| DJ533_RS03765 (DJ533_03775) | comM | 296701..297759 (+) | 1059 | WP_065993307.1 | pilus assembly protein PilM | Machinery gene |
| DJ533_RS03770 (DJ533_03780) | pilN | 297759..298391 (+) | 633 | WP_065993308.1 | PilN domain-containing protein | Machinery gene |
| DJ533_RS03775 (DJ533_03785) | pilO | 298388..299170 (+) | 783 | WP_065993309.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DJ533_RS03780 (DJ533_03790) | pilP | 299173..299700 (+) | 528 | WP_065993310.1 | pilus assembly protein PilP | Machinery gene |
| DJ533_RS03785 (DJ533_03795) | pilQ | 299766..301885 (+) | 2120 | Protein_241 | type IV pilus secretin PilQ | - |
| DJ533_RS03790 (DJ533_03800) | aroK | 301922..302464 (+) | 543 | WP_065993311.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23520.92 Da Isoelectric Point: 5.4403
>NTDB_id=292211 DJ533_RS03770 WP_065993308.1 297759..298391(+) (pilN) [Acinetobacter defluvii strain WCHA30]
MAKINLLPWREELREQRKKQFVAISIGIAILGFIIVLLAWMYFNQRLEDQEQANQLVVSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADLLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDADQAQANGGAK
MAKINLLPWREELREQRKKQFVAISIGIAILGFIIVLLAWMYFNQRLEDQEQANQLVVSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADLLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDADQAQANGGAK
Nucleotide
Download Length: 633 bp
>NTDB_id=292211 DJ533_RS03770 WP_065993308.1 297759..298391(+) (pilN) [Acinetobacter defluvii strain WCHA30]
ATGGCAAAGATTAATTTACTCCCGTGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
TATCGCTATATTGGGGTTTATCATTGTATTGTTGGCTTGGATGTATTTTAATCAGCGATTAGAAGATCAAGAGCAAGCAA
ACCAGTTAGTTGTAAGTACCAATCAAAACTTAGATACTCAACTCAAAACACTAGATGGTTTACAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAGTTGATTCAAGGTTTACAAGGTCAGCGACCTGTGACTGTACGTTTAGTCGATGAGTTAGTACG
TGTGGTTCCGCCAGCCATGTATATCACTAAATTTAGCCGTACTGGAGATAAATTTACCATCGAAGGGAAAGCAGAGAGTC
CAAACACTGTCGCGGATTTATTGCGTGGATTGGAAGCATCTGAGTGGTATAGAAATGCGTTCATGAATTCGTTCTTGGCA
GCAGAAGAAAATAAAAATAAACCAGCAACTTCAGTCGTGCCACGCGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGCGT
TGATATTGGGGAAATTGCACAGGCTGCGAAACCTGATGCAGATCAAGCGCAAGCGAATGGGGGTGCTAAATGA
ATGGCAAAGATTAATTTACTCCCGTGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
TATCGCTATATTGGGGTTTATCATTGTATTGTTGGCTTGGATGTATTTTAATCAGCGATTAGAAGATCAAGAGCAAGCAA
ACCAGTTAGTTGTAAGTACCAATCAAAACTTAGATACTCAACTCAAAACACTAGATGGTTTACAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAGTTGATTCAAGGTTTACAAGGTCAGCGACCTGTGACTGTACGTTTAGTCGATGAGTTAGTACG
TGTGGTTCCGCCAGCCATGTATATCACTAAATTTAGCCGTACTGGAGATAAATTTACCATCGAAGGGAAAGCAGAGAGTC
CAAACACTGTCGCGGATTTATTGCGTGGATTGGAAGCATCTGAGTGGTATAGAAATGCGTTCATGAATTCGTTCTTGGCA
GCAGAAGAAAATAAAAATAAACCAGCAACTTCAGTCGTGCCACGCGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGCGT
TGATATTGGGGAAATTGCACAGGCTGCGAAACCTGATGCAGATCAAGCGCAAGCGAATGGGGGTGCTAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.698 |
100 |
0.724 |
| comN | Acinetobacter baylyi ADP1 |
69.194 |
100 |
0.695 |