Detailed information NTG0291999

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: DIC78_RS18615
• Genome accession: NZ_CP029364
• Coordinates: 3616779..3617396 (+)
• Length: 205 a.a.
• NCBI ID: WP_127696752.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain ZB201702
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3611779..3622396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIC78_RS18580 (DIC78_18610)	aroE	3612439..3613275 (+)	837	WP_038954228.1	shikimate dehydrogenase	-
DIC78_RS18585 (DIC78_18615)	yhbY	3613275..3613565 (+)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
DIC78_RS18590 (DIC78_18620)	-	3613576..3614145 (+)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
DIC78_RS18595 (DIC78_18625)	yqeK	3614135..3614695 (+)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
DIC78_RS18600 (DIC78_18630)	rsfS	3614713..3615069 (+)	357	WP_044154484.1	ribosome silencing factor	-
DIC78_RS18605 (DIC78_18635)	-	3615066..3615809 (+)	744	WP_106020124.1	class I SAM-dependent DNA methyltransferase	-
DIC78_RS18610 (DIC78_18640)	comER	3615874..3616695 (-)	822	WP_024122113.1	late competence protein ComER	-
DIC78_RS18615 (DIC78_18645)	comEA	3616779..3617396 (+)	618	WP_127696752.1	helix-hairpin-helix domain-containing protein	Machinery gene
DIC78_RS18620 (DIC78_18650)	-	3617463..3618032 (+)	570	WP_010335007.1	ComE operon protein 2	-
DIC78_RS18625 (DIC78_18655)	comEC	3618036..3620366 (+)	2331	WP_127696944.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
DIC78_RS18630 (DIC78_18660)	-	3620405..3620539 (-)	135	WP_010335005.1	YqzM family protein	-
DIC78_RS18635	-	3620580..3620729 (+)	150	WP_003229985.1	hypothetical protein	-
DIC78_RS18640 (DIC78_18665)	holA	3620769..3621812 (+)	1044	WP_103672292.1	DNA polymerase III subunit delta	-
DIC78_RS18645 (DIC78_18670)	rpsT	3621827..3622093 (-)	267	WP_010335003.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22018.82 Da
• Isoelectric Point: 4.7586

>NTDB_id=291999 DIC78_RS18615 WP_127696752.1 3616779..3617396(+) (comEA) [Bacillus halotolerans strain ZB201702]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSTGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=291999 DIC78_RS18615 WP_127696752.1 3616779..3617396(+) (comEA) [Bacillus halotolerans strain ZB201702]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCACAGCAAGCGGCCGGCGGTGCTG
TACAAAGCAGTACGGGGAAGGAGACTTTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus N315	37.838	100	0.41
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Latilactobacillus sakei subsp. sakei 23K	36.239	100	0.385
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385