Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DIC78_RS15315 Genome accession   NZ_CP029364
Coordinates   3007025..3009328 (+) Length   767 a.a.
NCBI ID   WP_127696530.1    Uniprot ID   -
Organism   Bacillus halotolerans strain ZB201702     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3002025..3014328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIC78_RS15285 (DIC78_15310) - 3002025..3003494 (+) 1470 WP_024122686.1 nicotinate phosphoribosyltransferase -
  DIC78_RS15290 (DIC78_15315) - 3003630..3004859 (+) 1230 WP_127696527.1 EAL and HDOD domain-containing protein -
  DIC78_RS15295 (DIC78_15320) - 3004835..3005203 (-) 369 WP_106022008.1 hypothetical protein -
  DIC78_RS15300 (DIC78_15325) degQ 3005664..3005804 (+) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  DIC78_RS15305 (DIC78_15330) - 3006012..3006869 (+) 858 WP_164848141.1 polyprenyl synthetase family protein -
  DIC78_RS15310 (DIC78_15335) comX 3006838..3007011 (+) 174 WP_127696529.1 competence pheromone ComX -
  DIC78_RS15315 (DIC78_15340) comP 3007025..3009328 (+) 2304 WP_127696530.1 histidine kinase Regulator
  DIC78_RS15320 (DIC78_15345) comA 3009409..3010053 (+) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  DIC78_RS15325 (DIC78_15350) - 3010071..3010451 (+) 381 WP_044158943.1 hotdog fold thioesterase -
  DIC78_RS15330 (DIC78_15355) mnhG 3010490..3010864 (-) 375 WP_024122678.1 monovalent cation/H(+) antiporter subunit G -
  DIC78_RS15335 (DIC78_15360) - 3010848..3011132 (-) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  DIC78_RS15340 (DIC78_15365) - 3011132..3011608 (-) 477 WP_024122676.1 Na+/H+ antiporter subunit E -
  DIC78_RS15345 (DIC78_15370) - 3011614..3013095 (-) 1482 WP_106022012.1 Na+/H+ antiporter subunit D -
  DIC78_RS15350 (DIC78_15375) - 3013088..3013429 (-) 342 WP_095713974.1 Na(+)/H(+) antiporter subunit C -
  DIC78_RS15355 (DIC78_15380) - 3013429..3013860 (-) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 88715.15 Da        Isoelectric Point: 7.6364

>NTDB_id=291988 DIC78_RS15315 WP_127696530.1 3007025..3009328(+) (comP) [Bacillus halotolerans strain ZB201702]
MKLSKNTYSVILILLSMSYIFYLTYINVNNLFVGATANVNNKGQIEITRVSDYTMAYYAGVKKGDIVIKINQNQNVEPKD
LKQNTLKNVRSMTVIRSGEIVELKNLSLISEDNLFVYLIPVIFFFVCLSCIILILKINKEKNLVSAFILIIFLLTTGMAY
VSAGGSSKGDLISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKIFVVLYTVPVINVILELFRNCFDRGVLGKVNLV
SISLLYLIALFFIAVGLIKHKKTEQANILKTFLLINIFAFSPFVFLFVAPYIIFDDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQEPNSEFYTFKLTLLTYIIMLAVFYSKELLDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMISKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTREIGKIVQV
DKGFFMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLLFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLG
LVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVG
FDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=291988 DIC78_RS15315 WP_127696530.1 3007025..3009328(+) (comP) [Bacillus halotolerans strain ZB201702]
ATGAAATTATCTAAAAATACGTATTCCGTTATATTAATTTTACTCAGCATGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATCTATTTGTAGGAGCCACCGCAAATGTTAATAACAAAGGTCAAATAGAAATTACCAGAGTGTCAGATTACA
CAATGGCTTATTATGCAGGTGTCAAAAAAGGCGACATTGTAATTAAAATTAATCAGAATCAGAATGTTGAACCAAAAGAT
TTAAAACAGAATACATTAAAAAACGTTAGATCTATGACAGTTATAAGATCTGGTGAAATAGTTGAACTCAAAAACTTAAG
TTTAATAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTCTTCTTCGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAAAAAAATTTAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATGGCATAT
GTAAGTGCGGGAGGTTCGTCAAAAGGAGATCTAATAAGTCGATATGTAAATGTTATAACTTTAATATCCGTACCTGTAAA
TTATCTCTTGTTTATCTACCAATATATTAAGGAATTTGGATACAAGATTTTTAATGGGAAAATTTTTGTTGTTTTATATA
CAGTCCCTGTTATTAATGTAATATTAGAGTTGTTTAGAAATTGCTTTGATAGAGGAGTTTTGGGAAAGGTTAATTTAGTT
TCAATATCTCTTCTTTATTTAATAGCTTTATTTTTCATTGCTGTAGGCTTAATAAAGCACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTGATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTTTGTGGCACCTTACATTATTT
TTGATGACTATTATGTTTCTTCTTTTTTGGTTGCGCCTTTTCTTTTATTAATTCCGTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATCATCGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTCTGCT
TATTATTACAATTTATGACCTTGTACAAGAGCCAAATTCAGAATTTTATACGTTTAAACTAACTTTGCTTACGTATATTA
TTATGCTGGCTGTGTTTTATTCCAAAGAGCTCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGTATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCGTTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTTCTTGAAGTTTTGATGATTAGTAAAGTATGTGTTTTAGAAGTCGAAGGAGACTTAAATGTAAGATACTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCCGAAACGACCAGAGAAATCGGCAAAATAGTTCAGGTG
GATAAAGGTTTTTTTATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTTTTATGTTTATCATTCATGAATACTCC
CAAGCTGACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACAAGCATTACGATGGAGAACGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGCTGTTTACC
ATCGAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAACGGCA
GTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTGCAGATGA
ATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGA
CTGGTGAAGGCGCTGTCTAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAGATT
TACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAACGCAGTGAAACACT
CTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGATGATGGTGTCGGA
TTTGATCTAGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGG
ACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.562

99.739

0.584


Multiple sequence alignment