Detailed information NTG0291984

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: DIC78_RS13345
• Genome accession: NZ_CP029364
• Coordinates: 2614522..2615244 (+)
• Length: 240 a.a.
• NCBI ID: WP_127696434.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain ZB201702
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2609522..2620244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIC78_RS13320 (DIC78_13345)	degS	2609833..2610990 (+)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
DIC78_RS13325 (DIC78_13350)	degU	2611073..2611762 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
DIC78_RS13330 (DIC78_13355)	-	2611859..2612704 (+)	846	WP_106019639.1	DegV family protein	-
DIC78_RS13335 (DIC78_13360)	comFA	2612811..2614205 (+)	1395	WP_106019638.1	ATP-dependent helicase ComFA	Machinery gene
DIC78_RS13340 (DIC78_13365)	-	2614262..2614558 (+)	297	WP_024123028.1	late competence development ComFB family protein	-
DIC78_RS13345 (DIC78_13370)	comFC	2614522..2615244 (+)	723	WP_127696434.1	phosphoribosyltransferase family protein	Machinery gene
DIC78_RS13350 (DIC78_13375)	-	2615318..2615737 (+)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
DIC78_RS13355 (DIC78_13380)	flgM	2615817..2616083 (+)	267	WP_106019637.1	flagellar biosynthesis anti-sigma factor FlgM	-
DIC78_RS13360 (DIC78_13385)	flgN	2616099..2616581 (+)	483	WP_106019636.1	flagellar protein FlgN	-
DIC78_RS13365 (DIC78_13390)	flgK	2616600..2618123 (+)	1524	WP_095712911.1	flagellar hook-associated protein FlgK	-
DIC78_RS13370 (DIC78_13395)	flgL	2618133..2619029 (+)	897	WP_106019635.1	flagellar hook-associated protein FlgL	-
DIC78_RS13375 (DIC78_13400)	-	2619076..2619651 (+)	576	WP_024123021.1	DUF6470 family protein	-
DIC78_RS13380 (DIC78_13405)	fliW	2619672..2620103 (+)	432	WP_024123020.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27083.34 Da
• Isoelectric Point: 8.6986

>NTDB_id=291984 DIC78_RS13345 WP_127696434.1 2614522..2615244(+) (comFC) [Bacillus halotolerans strain ZB201702]
MRNETGGGSKKLICLLCDSQFSQAVSWCSLFLLKPDDRVCQFCRNKLQIIKGAICPLCGRPQTAHEVCADCEAWKSRIDD
GLRLSQNRSVYLYNDMMKETLARMKFRGDAAIISAFKNDFSSEFSAVYPDKRLVLVPIPLSEERKAERGFNQSQMLAECL
NRPILNPLIRLNNEKQSKKKKTERLLSEHVFETKNSSVEGMDIVLIDDLYTTGATLHYAARCLLEKGKAGSVSSFTLVRS

Nucleotide

• Length: 723 bp

>NTDB_id=291984 DIC78_RS13345 WP_127696434.1 2614522..2615244(+) (comFC) [Bacillus halotolerans strain ZB201702]
ATGCGAAACGAGACAGGAGGAGGCTCTAAAAAACTGATCTGTCTATTATGTGATTCACAATTTTCTCAAGCTGTTTCATG
GTGCTCACTATTCTTATTAAAACCTGACGACAGGGTCTGTCAGTTCTGCAGAAACAAATTACAGATCATCAAAGGGGCTA
TCTGTCCGCTTTGCGGCAGGCCTCAAACCGCTCATGAAGTGTGTGCGGATTGCGAGGCATGGAAATCAAGAATAGATGAC
GGCTTAAGGCTCAGTCAAAACCGTTCTGTTTACTTATATAATGACATGATGAAAGAAACGCTCGCCCGAATGAAATTCAG
GGGAGATGCAGCGATAATAAGCGCTTTTAAAAATGACTTTTCCTCAGAATTCTCTGCTGTCTACCCAGATAAACGCCTTG
TGCTCGTTCCCATTCCGTTAAGCGAAGAACGGAAAGCAGAACGCGGCTTTAACCAGTCACAAATGCTTGCTGAATGCTTA
AACCGGCCCATCCTCAATCCTCTCATCCGCCTGAATAATGAAAAGCAGTCTAAGAAAAAGAAAACGGAGCGCCTGCTTTC
AGAGCATGTTTTTGAAACAAAAAACAGCTCCGTTGAGGGTATGGATATCGTTTTAATCGACGATCTTTATACTACGGGCG
CCACTTTGCACTATGCTGCCCGCTGTTTATTGGAGAAAGGCAAAGCTGGTTCTGTGTCATCTTTTACCTTAGTGAGAAGC
TAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (184-238)

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	75.833	100	0.758