Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DGM85_RS14290 | Genome accession | NZ_CP029280 |
| Coordinates | 3324510..3325037 (-) | Length | 175 a.a. |
| NCBI ID | WP_099770622.1 | Uniprot ID | A0A3T0G0H7 |
| Organism | Xanthomonas phaseoli pv. phaseoli strain Px100 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3319510..3330037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGM85_RS14275 (DGM85_14975) | paoA | 3320388..3321038 (-) | 651 | WP_039570484.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| DGM85_RS14280 (DGM85_14980) | - | 3321447..3322454 (-) | 1008 | WP_039570482.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| DGM85_RS14285 (DGM85_14985) | - | 3322678..3324225 (+) | 1548 | WP_180301663.1 | sensor domain-containing diguanylate cyclase | - |
| DGM85_RS14290 (DGM85_14990) | ssb | 3324510..3325037 (-) | 528 | WP_099770622.1 | single-stranded DNA-binding protein | Machinery gene |
| DGM85_RS14295 (DGM85_14995) | - | 3325313..3326311 (+) | 999 | WP_017157215.1 | polyprenyl synthetase family protein | - |
| DGM85_RS14300 (DGM85_15000) | - | 3326514..3327314 (-) | 801 | WP_039573859.1 | dienelactone hydrolase family protein | - |
| DGM85_RS14305 (DGM85_15005) | murD | 3327627..3329033 (-) | 1407 | WP_039573857.1 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18800.64 Da Isoelectric Point: 5.3095
>NTDB_id=291593 DGM85_RS14290 WP_099770622.1 3324510..3325037(-) (ssb) [Xanthomonas phaseoli pv. phaseoli strain Px100]
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMQMLGGRGEGGGGGMGGDRPQRSASRQQGGGGGQGGGYGGGGQDYAPRRQQPAQQQ
SAPPMDDFADDDIPF
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMQMLGGRGEGGGGGMGGDRPQRSASRQQGGGGGQGGGYGGGGQDYAPRRQQPAQQQ
SAPPMDDFADDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=291593 DGM85_RS14290 WP_099770622.1 3324510..3325037(-) (ssb) [Xanthomonas phaseoli pv. phaseoli strain Px100]
ATGGCCCGCGGCATCAACAAAGTCATCCTCGTCGGCAACCTCGGCAACGATCCCGATACCAAATACACCCAGGCCGGCAT
GGCAATCACGCGCGTGAGCCTGGCCACCACCAGCATGCGCAAGGACCGCGACGGCAATAACCAGGAACGTACCGAGTGGC
ACCGCGTGGTGTTTTTCGGAAAGCTGGGCGAAATTGCCGGCGAATACCTGCGCAAGGGGTCGCAGGTCTATGTCGAAGGC
GAACTGCGCTACGACAAGTACACCGGCCAGGACGGCGTGGAGAAGTACAGCACCGACATCGTCGCCAACGAGATGCAGAT
GCTCGGCGGCCGTGGTGAAGGCGGCGGGGGCGGGATGGGCGGCGATCGCCCGCAGCGCTCGGCATCGCGTCAGCAGGGCG
GCGGCGGTGGGCAGGGCGGTGGATACGGTGGCGGTGGGCAGGACTATGCGCCGCGCCGTCAGCAGCCGGCCCAGCAACAG
TCGGCACCGCCGATGGACGATTTCGCCGACGACGATATCCCGTTCTGA
ATGGCCCGCGGCATCAACAAAGTCATCCTCGTCGGCAACCTCGGCAACGATCCCGATACCAAATACACCCAGGCCGGCAT
GGCAATCACGCGCGTGAGCCTGGCCACCACCAGCATGCGCAAGGACCGCGACGGCAATAACCAGGAACGTACCGAGTGGC
ACCGCGTGGTGTTTTTCGGAAAGCTGGGCGAAATTGCCGGCGAATACCTGCGCAAGGGGTCGCAGGTCTATGTCGAAGGC
GAACTGCGCTACGACAAGTACACCGGCCAGGACGGCGTGGAGAAGTACAGCACCGACATCGTCGCCAACGAGATGCAGAT
GCTCGGCGGCCGTGGTGAAGGCGGCGGGGGCGGGATGGGCGGCGATCGCCCGCAGCGCTCGGCATCGCGTCAGCAGGGCG
GCGGCGGTGGGCAGGGCGGTGGATACGGTGGCGGTGGGCAGGACTATGCGCCGCGCCGTCAGCAGCCGGCCCAGCAACAG
TCGGCACCGCCGATGGACGATTTCGCCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
44.33 |
100 |
0.491 |
| ssb | Glaesserella parasuis strain SC1401 |
45.902 |
100 |
0.48 |
| ssb | Neisseria meningitidis MC58 |
42.391 |
100 |
0.446 |
| ssb | Neisseria gonorrhoeae MS11 |
42.391 |
100 |
0.446 |