Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   DEH83_RS08100 Genome accession   NZ_CP029207
Coordinates   1594437..1595441 (+) Length   334 a.a.
NCBI ID   WP_037596820.1    Uniprot ID   A0A7G9AX04
Organism   Streptococcus constellatus strain TCV107     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1589437..1600441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS08080 (DEH83_08115) rfbB 1589634..1590680 (+) 1047 WP_255776558.1 dTDP-glucose 4,6-dehydratase -
  DEH83_RS08085 (DEH83_08120) galE 1590715..1591734 (+) 1020 WP_187327759.1 UDP-glucose 4-epimerase GalE -
  DEH83_RS08090 (DEH83_08125) - 1591994..1592575 (+) 582 WP_003068681.1 class I SAM-dependent methyltransferase -
  DEH83_RS08095 (DEH83_08130) - 1593090..1594172 (-) 1083 WP_003068682.1 Xaa-Pro peptidase family protein -
  DEH83_RS08100 (DEH83_08135) ccpA 1594437..1595441 (+) 1005 WP_037596820.1 catabolite control protein A Regulator
  DEH83_RS08105 (DEH83_08140) - 1595533..1596531 (+) 999 WP_003068685.1 glycosyltransferase family 4 protein -
  DEH83_RS08110 (DEH83_08145) - 1596533..1597846 (+) 1314 WP_006268747.1 glycosyltransferase family 4 protein -
  DEH83_RS08115 (DEH83_08150) - 1597873..1598205 (+) 333 WP_006268722.1 hypothetical protein -
  DEH83_RS08120 (DEH83_08155) micA 1598506..1599207 (+) 702 WP_003035055.1 response regulator YycF Regulator

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37095.21 Da        Isoelectric Point: 5.7809

>NTDB_id=291210 DEH83_RS08100 WP_037596820.1 1594437..1595441(+) (ccpA) [Streptococcus constellatus strain TCV107]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVEHLTKNNKKIAFVSGPLVDDINGKIRLIGYKEALKKAKLSYSEGLVFESKYSYEDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKDVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=291210 DEH83_RS08100 WP_037596820.1 1594437..1595441(+) (ccpA) [Streptococcus constellatus strain TCV107]
ATGAACACAGACGATACTGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCGACCGTTAGCCGTGTCGT
AAACGGCAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTCATTGACCGCCTTGACTATCGACCAAATG
CAGTTGCTCGTGGACTTGCAAGTAAGAAAACGACAACAGTAGGAGTTGTCATTCCAAACATTACAAGCAGTTATTTTGCA
ACGCTTGCGAAAGGAATTGATGACATCGCAGAGATGTATAAGTATAATATTGTTTTGGCAAATAGTGATGAGGATGATGA
CAAGGAAGTTTCTGTTGTCAATACCTTGTTCTCAAAACAAGTGGACGGCATTATCTTTATGGGATATCATCTAACAGAAA
AGATTCGTTCTGAGTTTTCTCGTTCAAGGACGCCGGTTGTACTTGCAGGAACGGTTGACGTGGAACATCAATTGCCAAGT
GTTAATATTGATTACAAACAAGCAACTATGGATGCAGTAGAGCACCTCACTAAAAACAATAAAAAAATTGCTTTTGTGAG
TGGACCTTTGGTAGATGATATAAATGGTAAGATTCGTTTGATTGGTTACAAAGAAGCGTTGAAAAAAGCAAAACTTTCTT
ATAGTGAAGGGCTTGTCTTTGAGTCTAAATACAGCTATGAGGATGGCTATCAATTGGCAGAGCGTGTCATTGCTTCTAAA
GCGACAGCGGCCTTTGTGACTGGCGATGAACTGGCAGCTGGATTGTTAAATGGCTTATCAGACAAAGATGTAAATATACC
AGAAGATTTTGAAATCATTACTAGTGATGATTCGCAGGTAGCACGTTTTACTCGTCCGAATTTGACGACAATTGGACAAC
CTTTGTACGATCTTGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTG
GTGTTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGGAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7G9AX04

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.419

100

0.904

  ccpA Streptococcus pneumoniae D39

87.425

100

0.874

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

99.102

0.575


Multiple sequence alignment