Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DEH83_RS04435 Genome accession   NZ_CP029207
Coordinates   875111..875878 (-) Length   255 a.a.
NCBI ID   WP_003071657.1    Uniprot ID   U2YCD6
Organism   Streptococcus constellatus strain TCV107     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 870111..880878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS04410 (DEH83_04395) ychF 870200..871315 (-) 1116 WP_255777176.1 redox-regulated ATPase YchF -
  DEH83_RS04415 (DEH83_04400) - 871462..871962 (+) 501 WP_006268820.1 YehR family lipoprotein -
  DEH83_RS04420 (DEH83_04405) - 872049..872246 (-) 198 WP_003071662.1 DUF951 domain-containing protein -
  DEH83_RS04425 (DEH83_04410) dnaN 872246..873382 (-) 1137 WP_048800763.1 DNA polymerase III subunit beta -
  DEH83_RS04430 (DEH83_04415) dnaA 873539..874882 (-) 1344 WP_006270358.1 chromosomal replication initiator protein DnaA -
  DEH83_RS04435 (DEH83_04420) spo0J 875111..875878 (-) 768 WP_003071657.1 ParB/RepB/Spo0J family partition protein Regulator
  DEH83_RS04440 (DEH83_04425) htrA 875933..877123 (-) 1191 WP_006270334.1 S1C family serine protease Regulator
  DEH83_RS04445 (DEH83_04430) rlmH 877328..877807 (+) 480 WP_255777177.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DEH83_RS04455 (DEH83_04440) - 878090..878236 (+) 147 WP_006270349.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  DEH83_RS04460 (DEH83_04445) comD/comD2 878253..879578 (+) 1326 WP_304675344.1 sensor histidine kinase Regulator
  DEH83_RS04465 (DEH83_04450) comE 879578..880327 (+) 750 WP_003071650.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29713.19 Da        Isoelectric Point: 9.5149

>NTDB_id=291178 DEH83_RS04435 WP_003071657.1 875111..875878(-) (spo0J) [Streptococcus constellatus strain TCV107]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIMEAIKEGRISQGHA
RLLINLSEKEQNQWFTKILSQELSVRQLEKQLHPHQKKTSAKNKYQLFLKEEENRLKKIFGTEISLQFSKQSQSGKICIH
FSSQEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=291178 DEH83_RS04435 WP_003071657.1 875111..875878(-) (spo0J) [Streptococcus constellatus strain TCV107]
ATGGAAAAATATCAATATATTACACTCAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCAATAATTGGTT
ATGAATTATTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACTAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATTATTGAAAATTTACAACGAGAAGACTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAAGGGTTGACACACAAAGAAATCGCTCAAACAATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGTTTATTAAACTTACCTCTTAATATTATGGAAGCGATAAAAGAAGGAAGAATTTCTCAAGGACATGCT
CGTTTACTTATCAACTTATCAGAAAAAGAGCAAAATCAGTGGTTCACTAAAATCCTATCTCAAGAACTTTCAGTTCGACA
GCTAGAAAAACAATTGCATCCACATCAAAAAAAGACTTCAGCAAAAAACAAGTACCAACTTTTTCTCAAAGAAGAAGAAA
ACAGATTGAAAAAGATATTCGGTACAGAAATCTCACTCCAATTTTCTAAGCAATCGCAATCTGGAAAAATCTGTATTCAC
TTTTCAAGTCAAGAAGAATATCAAAGAATTATTGATAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2YCD6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.725

100

0.537

Multiple sequence alignment