Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SGO_RS03835 Genome accession   NC_009785
Coordinates   820868..821671 (+) Length   267 a.a.
NCBI ID   WP_008809002.1    Uniprot ID   A8AWC0
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 815868..826671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS11035 (SGO_0777) - 816208..816579 (+) 372 WP_012000239.1 hypothetical protein -
  SGO_RS03820 (SGO_0778) thrS 816671..818614 (+) 1944 WP_012000240.1 threonine--tRNA ligase -
  SGO_RS03825 (SGO_0779) micA 818820..819521 (+) 702 WP_012000241.1 response regulator YycF Regulator
  SGO_RS03830 (SGO_0780) micB 819514..820875 (+) 1362 WP_008809003.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SGO_RS03835 (SGO_0781) vicX 820868..821671 (+) 804 WP_008809002.1 MBL fold metallo-hydrolase Regulator
  SGO_RS03840 (SGO_0782) - 821706..822062 (+) 357 WP_008809001.1 YbaN family protein -
  SGO_RS03845 (SGO_0783) rnc 822305..823003 (+) 699 WP_012000242.1 ribonuclease III -
  SGO_RS03850 (SGO_0784) smc 822994..826527 (+) 3534 WP_012000243.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29688.63 Da        Isoelectric Point: 5.9427

>NTDB_id=29072 SGO_RS03835 WP_008809002.1 820868..821671(+) (vicX) [Streptococcus gordonii str. Challis substr. CH1]
MTKEGFKYSILASGSSGNCFYLETAQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=29072 SGO_RS03835 WP_008809002.1 820868..821671(+) (vicX) [Streptococcus gordonii str. Challis substr. CH1]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAGCCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGGAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGCCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTTGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGACTTTCAAGTTTTGGATACTTCGCCAGATACAGCTACGCCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AWC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment