Detailed information NTG0029071

Bioinformatically predicted

Overview

• Name: micB
• Type: Regulator
• Locus tag: SGO_RS03830
• Genome accession: NC_009785
• Coordinates: 819514..820875 (+)
• Length: 453 a.a.
• NCBI ID: WP_008809003.1
• Uniprot ID: -
• Organism: Streptococcus gordonii str. Challis substr. CH1
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 814514..825875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGO_RS03810 (SGO_0776)	-	815512..815874 (+)	363	WP_012000238.1	hypothetical protein	-
SGO_RS11035 (SGO_0777)	-	816208..816579 (+)	372	WP_012000239.1	hypothetical protein	-
SGO_RS03820 (SGO_0778)	thrS	816671..818614 (+)	1944	WP_012000240.1	threonine--tRNA ligase	-
SGO_RS03825 (SGO_0779)	micA	818820..819521 (+)	702	WP_012000241.1	response regulator YycF	Regulator
SGO_RS03830 (SGO_0780)	micB	819514..820875 (+)	1362	WP_008809003.1	cell wall metabolism sensor histidine kinase VicK	Regulator
SGO_RS03835 (SGO_0781)	vicX	820868..821671 (+)	804	WP_008809002.1	MBL fold metallo-hydrolase	Regulator
SGO_RS03840 (SGO_0782)	-	821706..822062 (+)	357	WP_008809001.1	YbaN family protein	-
SGO_RS03845 (SGO_0783)	rnc	822305..823003 (+)	699	WP_012000242.1	ribonuclease III	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 51641.69 Da
• Isoelectric Point: 4.3991

>NTDB_id=29071 SGO_RS03830 WP_008809003.1 819514..820875(+) (micB) [Streptococcus gordonii str. Challis substr. CH1]
MIENIRQFVFSVDFVFVLIVLGFILVVALLFLENRRDNRQLRLLNQKIKDLIAGDYSEVLDMQGSPEITDMTNSINDLSE
VTRLTQENLEQETKRLTSILSYMTDGVLATNRRGQIIMINDMASKQLGVDPEEVQNTSILDLLDIADEYDLRDLITKMPE
LTIDSQDENGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPEFVKVSLTETNRMMRMVSDLLSLSRIDNDSSHLDVELTNFTAFITFILNRFDKIKSQDETKKYEIVRDYPITPIW
VEIDTDKMTQVIDNIMNNAIKYSPDGGKITVGMKTTEDQLIISISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHHGFIWAKSEYEVGSTFTIVLPYDKDAVLDDGWESEEVESKDD

Nucleotide

• Length: 1362 bp

>NTDB_id=29071 SGO_RS03830 WP_008809003.1 819514..820875(+) (micB) [Streptococcus gordonii str. Challis substr. CH1]
ATGATTGAAAATATTAGACAATTTGTGTTTTCTGTAGATTTTGTTTTTGTTTTAATTGTTTTAGGTTTTATTTTGGTTGT
TGCCCTGCTCTTTTTAGAGAATCGAAGGGATAATCGCCAACTTCGTCTGCTCAATCAAAAGATCAAAGATTTAATCGCAG
GAGACTATTCCGAGGTTCTGGATATGCAGGGCAGTCCAGAAATTACGGATATGACCAATAGTATAAATGATTTGTCTGAG
GTGACTAGATTAACACAAGAAAATCTGGAGCAAGAAACCAAACGTTTGACTAGTATCCTGTCCTACATGACAGATGGGGT
TTTGGCAACCAATCGTAGGGGCCAGATTATCATGATTAATGATATGGCTTCTAAGCAATTAGGTGTTGATCCAGAGGAAG
TCCAAAATACAAGTATTTTAGACTTGTTAGATATTGCGGATGAATATGATCTGCGAGATTTAATTACCAAGATGCCGGAG
TTGACGATTGATTCACAGGATGAAAATGGAGAATATTTAAGTCTGCGTGTTCGTTTTGCCTTGGTTCGTAGGGAATCTGG
TTTTATCTCTGGTTTGGTAGCTGTTCTGCACGATACGACGGAACAGGAAAAAGAGGAGCGGGAACGTCGACTTTTTGTAT
CAAATGTTAGTCATGAGCTCCGTACCCCTTTGACAAGTGTTAAGTCTTACCTAGAAGCTTTGGATGAGGGCGCTCTTTCT
GAGCCAGTTGCACCTGAATTTGTTAAAGTTTCTCTTACTGAAACGAACCGAATGATGCGGATGGTTTCTGATTTGCTTAG
CTTATCAAGGATTGATAATGATAGTAGTCATTTGGATGTAGAATTAACTAATTTTACAGCTTTTATCACTTTTATTTTGA
ATCGTTTTGATAAGATTAAAAGTCAGGATGAAACCAAAAAATATGAGATTGTACGAGATTATCCAATCACACCTATTTGG
GTTGAAATTGATACTGATAAAATGACGCAGGTCATTGATAATATCATGAATAATGCTATCAAGTATTCTCCAGATGGTGG
AAAGATTACCGTAGGGATGAAAACGACGGAAGATCAGCTGATTATTTCAATTTCTGATGAAGGATTGGGAATTCCCAAAA
AAGACTTGCCTAAGATCTTTGACCGTTTTTATCGAGTGGATAAGGCTCGAAGCCGTGCGCAAGGTGGAACGGGCTTAGGA
CTTGCGATTGCAAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCCAAGAGTGAGTATGAAGTCGGATCAACTTT
TACAATTGTCCTGCCGTATGATAAGGATGCTGTTTTGGATGATGGCTGGGAAAGTGAAGAAGTAGAAAGTAAAGATGACT
AA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (96-198)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (324-434)

• His Kinase A (phospho-acceptor) domain (HisKA) (209-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
micB	Streptococcus pneumoniae Cp1015	80.822	96.689	0.781
vicK	Streptococcus mutans UA159	70.316	90.728	0.638