Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   DDT09_RS05815 Genome accession   NZ_CP029070
Coordinates   1126595..1127251 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain ALB69     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121595..1132251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDT09_RS05790 (DDT09_05790) oppF 1122124..1123041 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  DDT09_RS05795 (DDT09_05795) - 1123148..1124335 (+) 1188 WP_061862068.1 putative glycoside hydrolase -
  DDT09_RS05800 (DDT09_05800) - 1124453..1125031 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  DDT09_RS05805 (DDT09_05805) spx 1125210..1125605 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  DDT09_RS05810 (DDT09_05810) - 1125663..1126319 (-) 657 WP_014417421.1 TerC family protein -
  DDT09_RS05815 (DDT09_05815) mecA 1126595..1127251 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  DDT09_RS05820 (DDT09_05820) - 1127402..1128562 (+) 1161 WP_061862069.1 competence protein CoiA family protein -
  DDT09_RS05825 (DDT09_05825) pepF 1128790..1130619 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  DDT09_RS20275 - 1130657..1130824 (-) 168 WP_003155026.1 hypothetical protein -
  DDT09_RS05830 (DDT09_05830) spxH 1131111..1132013 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=289946 DDT09_RS05815 WP_003155032.1 1126595..1127251(+) (mecA) [Bacillus amyloliquefaciens strain ALB69]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=289946 DDT09_RS05815 WP_003155032.1 1126595..1127251(+) (mecA) [Bacillus amyloliquefaciens strain ALB69]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment