Detailed information NTG0289913

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAALB65_RS17400
• Genome accession: NZ_CP029069
• Coordinates: 3499719..3500882 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain ALB65
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3494719..3505882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAALB65_RS17370 (BAALB65_17370)	-	3494984..3495403 (-)	420	WP_061861586.1	TIGR03826 family flagellar region protein	-
BAALB65_RS17375 (BAALB65_17375)	comFC	3495477..3496166 (-)	690	WP_204082506.1	ComF family protein	Machinery gene
BAALB65_RS17380 (BAALB65_17380)	-	3496172..3496456 (-)	285	WP_022553866.1	competence protein ComFB	-
BAALB65_RS17385 (BAALB65_17385)	comFA	3496514..3497899 (-)	1386	WP_109567248.1	DEAD/DEAH box helicase	Machinery gene
BAALB65_RS17390 (BAALB65_17390)	-	3498007..3498855 (-)	849	WP_003151387.1	DegV family protein	-
BAALB65_RS17395 (BAALB65_17395)	degU	3498953..3499642 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAALB65_RS17400 (BAALB65_17400)	degS	3499719..3500882 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BAALB65_RS17405 (BAALB65_17405)	-	3501105..3501752 (+)	648	WP_007614107.1	YigZ family protein	-
BAALB65_RS17410 (BAALB65_17410)	-	3501757..3502971 (+)	1215	WP_100262038.1	LCP family protein	-
BAALB65_RS17415 (BAALB65_17415)	-	3503071..3504147 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BAALB65_RS17420 (BAALB65_17420)	-	3504279..3505475 (-)	1197	WP_022553869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=289913 BAALB65_RS17400 WP_007407484.1 3499719..3500882(-) (degS) [Bacillus amyloliquefaciens strain ALB65]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=289913 BAALB65_RS17400 WP_007407484.1 3499719..3500882(-) (degS) [Bacillus amyloliquefaciens strain ALB65]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTGGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951