Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   DBK22_RS10430 Genome accession   NZ_CP028961
Coordinates   2118935..2119921 (-) Length   328 a.a.
NCBI ID   WP_308219300.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102752     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2113935..2124921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBK22_RS10395 (DBK22_02092) - 2114191..2114667 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  DBK22_RS10400 (DBK22_02093) - 2114667..2114951 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  DBK22_RS10405 (DBK22_02094) mnhG 2114935..2115309 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  DBK22_RS10410 (DBK22_02095) - 2115349..2115732 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  DBK22_RS10415 (DBK22_02096) comA 2115754..2116398 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  DBK22_RS10420 (DBK22_02097) comP 2116479..2118782 (-) 2304 WP_160242253.1 histidine kinase Regulator
  DBK22_RS10430 (DBK22_02099) comQ 2118935..2119921 (-) 987 WP_308219300.1 class 1 isoprenoid biosynthesis enzyme Regulator
  DBK22_RS10435 (DBK22_02100) degQ 2120052..2120192 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  DBK22_RS10440 (DBK22_02101) - 2120658..2120999 (+) 342 WP_082998527.1 hypothetical protein -
  DBK22_RS10445 (DBK22_02102) - 2121006..2122229 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  DBK22_RS10450 (DBK22_02103) - 2122359..2123825 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  DBK22_RS10455 (DBK22_02104) - 2123843..2124394 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  DBK22_RS10460 (DBK22_02105) - 2124491..2124889 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37743.38 Da        Isoelectric Point: 5.4671

>NTDB_id=289002 DBK22_RS10430 WP_308219300.1 2118935..2119921(-) (comQ) [Bacillus velezensis strain SRCM102752]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LCIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCETEVENLNLDIKKIKIIKKHLLNIKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=289002 DBK22_RS10430 WP_308219300.1 2118935..2119921(-) (comQ) [Bacillus velezensis strain SRCM102752]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAAAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGAAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATATTAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-232)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.938

88.11

0.546


Multiple sequence alignment