Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   DBK22_RS10420 Genome accession   NZ_CP028961
Coordinates   2116479..2118782 (-) Length   767 a.a.
NCBI ID   WP_160242253.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102752     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2111479..2123782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBK22_RS10380 (DBK22_02089) - 2111939..2112370 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  DBK22_RS10385 (DBK22_02090) - 2112370..2112711 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  DBK22_RS10390 (DBK22_02091) - 2112704..2114185 (+) 1482 WP_076424452.1 Na+/H+ antiporter subunit D -
  DBK22_RS10395 (DBK22_02092) - 2114191..2114667 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  DBK22_RS10400 (DBK22_02093) - 2114667..2114951 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  DBK22_RS10405 (DBK22_02094) mnhG 2114935..2115309 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  DBK22_RS10410 (DBK22_02095) - 2115349..2115732 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  DBK22_RS10415 (DBK22_02096) comA 2115754..2116398 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  DBK22_RS10420 (DBK22_02097) comP 2116479..2118782 (-) 2304 WP_160242253.1 histidine kinase Regulator
  DBK22_RS10430 (DBK22_02099) comQ 2118935..2119921 (-) 987 WP_308219300.1 class 1 isoprenoid biosynthesis enzyme Regulator
  DBK22_RS10435 (DBK22_02100) degQ 2120052..2120192 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  DBK22_RS10440 (DBK22_02101) - 2120658..2120999 (+) 342 WP_082998527.1 hypothetical protein -
  DBK22_RS10445 (DBK22_02102) - 2121006..2122229 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 89077.59 Da        Isoelectric Point: 8.7582

>NTDB_id=289001 DBK22_RS10420 WP_160242253.1 2116479..2118782(-) (comP) [Bacillus velezensis strain SRCM102752]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSRANEVLIMLISIQNKVILHYEDDGVG
FNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=289001 DBK22_RS10420 WP_160242253.1 2116479..2118782(-) (comP) [Bacillus velezensis strain SRCM102752]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGAATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCCGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGC
CTGGTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACGGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGA
TTCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGTATGGGTCTTTCAGGTATTAAGGAGCGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.117

100

0.734

Multiple sequence alignment