Detailed information NTG0288605

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DB278_RS04330
• Genome accession: NZ_CP028926
• Coordinates: 870051..871172 (-)
• Length: 373 a.a.
• NCBI ID: WP_108511650.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain 20N
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 865051..876172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DB278_RS04315 (DB278_04315)	tal	865871..866824 (-)	954	WP_108511647.1	transaldolase	-
DB278_RS04320 (DB278_04320)	-	866982..867533 (+)	552	WP_108511648.1	DNA-3-methyladenine glycosylase I	-
DB278_RS04325 (DB278_04325)	lptD	867597..869945 (+)	2349	WP_108511649.1	LPS assembly protein LptD	-
DB278_RS04330 (DB278_04330)	dprA	870051..871172 (-)	1122	WP_108511650.1	DNA-processing protein DprA	Machinery gene
DB278_RS04335 (DB278_04335)	-	871326..871919 (-)	594	WP_005718382.1	cytochrome c3 family protein	-
DB278_RS04340 (DB278_04340)	-	871935..872360 (-)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
DB278_RS04345 (DB278_04345)	napH	872366..873241 (-)	876	WP_083003815.1	quinol dehydrogenase ferredoxin subunit NapH	-
DB278_RS04350 (DB278_04350)	napG	873241..873993 (-)	753	WP_096743495.1	ferredoxin-type protein NapG	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41560.70 Da
• Isoelectric Point: 6.2628

>NTDB_id=288605 DB278_RS04330 WP_108511650.1 870051..871172(-) (dprA) [Pasteurella multocida strain 20N]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSLAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSARQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGCSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPTLPRTENAFSQQVTDTSTISTARITP
EHPELYAQIGYMPVSIDVLAQQANLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=288605 DB278_RS04330 WP_108511650.1 870051..871172(-) (dprA) [Pasteurella multocida strain 20N]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGCTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCTAGCAGAATTAATGGAATATGATACAAAAGCATTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTCGCTACGCT
ATCAGCACGGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCTGATATTGTGGTGACCAGTGGCTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGTGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTGATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTCTTTGCGTTACCGGGGCAGATTCAACATGGATGTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTTTCGCCTTATTCGCATTGTGCCATGC
CAACGTTGCCTCGTACGGAGAACGCCTTTTCTCAGCAGGTAACAGACACATCAACCATCAGTACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCCAAATTGGCTATATGCCTGTCAGTATTGATGTATTAGCCCAACAAGCCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTACAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.351	99.196	0.609
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	44.652	100	0.448
dprA	Vibrio campbellii strain DS40M4	44.865	99.196	0.445
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394