Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJ12567_RS05290 | Genome accession | NZ_CP028909 |
| Coordinates | 1011000..1011302 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 12567 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1006000..1016302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ12567_RS05265 (CJ12567_1014) | rpsR | 1006362..1006622 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJ12567_RS05270 (CJ12567_1015) | lon | 1006683..1009058 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| CJ12567_RS05275 (CJ12567_1016) | - | 1009075..1009722 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJ12567_RS05280 (CJ12567_1017) | fliW | 1009883..1010272 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJ12567_RS05285 (CJ12567_1018) | proC | 1010272..1011003 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJ12567_RS05290 (CJ12567_1019) | ctsT | 1011000..1011302 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJ12567_RS05295 (CJ12567_1020) | - | 1011299..1011961 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJ12567_RS05300 (CJ12567_1021) | - | 1011958..1012410 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJ12567_RS05305 (CJ12567_1022) | hemD | 1012407..1013036 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| CJ12567_RS05310 (CJ12567_1023) | thiE | 1013014..1013646 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| CJ12567_RS05315 (CJ12567_1024) | thiD | 1013636..1014448 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJ12567_RS05320 (CJ12567_1025) | - | 1014445..1015131 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| CJ12567_RS05325 (CJ12567_1026) | - | 1015128..1015889 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=288396 CJ12567_RS05290 WP_002853046.1 1011000..1011302(+) (ctsT) [Campylobacter jejuni strain 12567]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=288396 CJ12567_RS05290 WP_002853046.1 1011000..1011302(+) (ctsT) [Campylobacter jejuni strain 12567]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |