Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CDG57_RS01380 | Genome accession | NZ_CP028800 |
| Coordinates | 243027..243611 (+) | Length | 194 a.a. |
| NCBI ID | WP_004909838.1 | Uniprot ID | A0A8I0V5Q1 |
| Organism | Acinetobacter junii strain WCHAJ59 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 238027..248611
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG57_RS01360 (CDG57_01365) | tenA | 238261..238935 (-) | 675 | WP_004951380.1 | thiaminase II | - |
| CDG57_RS01365 (CDG57_01370) | - | 239110..240192 (+) | 1083 | WP_004909842.1 | DUF475 domain-containing protein | - |
| CDG57_RS01370 (CDG57_01375) | - | 240261..241415 (-) | 1155 | WP_108565295.1 | IS4 family transposase | - |
| CDG57_RS01375 (CDG57_01380) | - | 241610..242974 (+) | 1365 | WP_005403380.1 | MFS transporter | - |
| CDG57_RS01380 (CDG57_01385) | ssb | 243027..243611 (+) | 585 | WP_004909838.1 | single-stranded DNA-binding protein | Machinery gene |
| CDG57_RS01385 (CDG57_01390) | - | 244118..245559 (+) | 1442 | Protein_219 | amino acid permease | - |
| CDG57_RS01390 (CDG57_01395) | - | 245632..247131 (-) | 1500 | WP_004964862.1 | PLP-dependent aminotransferase family protein | - |
| CDG57_RS01395 (CDG57_01400) | gabT | 247286..248578 (+) | 1293 | WP_004964859.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21241.96 Da Isoelectric Point: 6.7308
>NTDB_id=287785 CDG57_RS01380 WP_004909838.1 243027..243611(+) (ssb) [Acinetobacter junii strain WCHAJ59]
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGGEHQAGNDFNQPRFNNNQGGGYQNTGYNNNQNGYGQGGGFGGGNQG
NYAGSPQAGNGFNTPKAAPQPAAAPADLDDDLPF
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGGEHQAGNDFNQPRFNNNQGGGYQNTGYNNNQNGYGQGGGFGGGNQG
NYAGSPQAGNGFNTPKAAPQPAAAPADLDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=287785 CDG57_RS01380 WP_004909838.1 243027..243611(+) (ssb) [Acinetobacter junii strain WCHAJ59]
ATGCGTGGTGTGAATAAAGTTATTTTAGTCGGTACTTTGGGTAAAGATCCTGAGACAAAAACCTTTCCAAATGGTGGATC
ACTGACCCAATTTTCGATTGCAACAAGTGAATCGTGGACAGATAAAAATACAGGCGAACGAAAAGAACAAACAGAATGGC
ATCGTATCGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATACTTACGTAAAGGTTCGAAAGTTTATATCGAAGGT
TCATTGCGTACGCGCCAATGGACAGACCAAAATGGTCAAGAGCGTTACAGCACCGAAATTCGTGGTGACCAAATGCAAAT
GCTCGATTCTCGCCAGCAAGGTGGTGAGCATCAAGCGGGTAATGATTTTAACCAACCGCGTTTTAACAACAATCAAGGCG
GTGGCTACCAAAATACAGGCTATAACAACAACCAAAATGGTTATGGTCAAGGTGGCGGTTTTGGTGGTGGAAATCAGGGC
AATTATGCAGGCAGTCCGCAAGCAGGTAATGGTTTTAATACACCAAAAGCCGCACCTCAACCTGCTGCTGCTCCAGCTGA
CTTAGATGATGATTTACCGTTCTAA
ATGCGTGGTGTGAATAAAGTTATTTTAGTCGGTACTTTGGGTAAAGATCCTGAGACAAAAACCTTTCCAAATGGTGGATC
ACTGACCCAATTTTCGATTGCAACAAGTGAATCGTGGACAGATAAAAATACAGGCGAACGAAAAGAACAAACAGAATGGC
ATCGTATCGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATACTTACGTAAAGGTTCGAAAGTTTATATCGAAGGT
TCATTGCGTACGCGCCAATGGACAGACCAAAATGGTCAAGAGCGTTACAGCACCGAAATTCGTGGTGACCAAATGCAAAT
GCTCGATTCTCGCCAGCAAGGTGGTGAGCATCAAGCGGGTAATGATTTTAACCAACCGCGTTTTAACAACAATCAAGGCG
GTGGCTACCAAAATACAGGCTATAACAACAACCAAAATGGTTATGGTCAAGGTGGCGGTTTTGGTGGTGGAAATCAGGGC
AATTATGCAGGCAGTCCGCAAGCAGGTAATGGTTTTAATACACCAAAAGCCGCACCTCAACCTGCTGCTGCTCCAGCTGA
CTTAGATGATGATTTACCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.246 |
100 |
0.526 |
| ssb | Vibrio cholerae strain A1552 |
44.67 |
100 |
0.454 |
| ssb | Neisseria gonorrhoeae MS11 |
39.583 |
98.969 |
0.392 |
| ssb | Neisseria meningitidis MC58 |
39.583 |
98.969 |
0.392 |