Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGH16_RS03380 | Genome accession | NZ_CP034032 |
| Coordinates | 549509..550033 (+) | Length | 174 a.a. |
| NCBI ID | WP_003695064.1 | Uniprot ID | Q5F7Y0 |
| Organism | Neisseria gonorrhoeae strain FQ01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 544509..555033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGH16_RS03340 (EGH16_03340) | - | 544695..545375 (+) | 681 | WP_240640299.1 | opacity family porin | - |
| EGH16_RS03355 (EGH16_03355) | - | 546093..546583 (+) | 491 | Protein_564 | transposase | - |
| EGH16_RS03360 (EGH16_03360) | - | 546620..546886 (+) | 267 | Protein_565 | transposase | - |
| EGH16_RS03370 (EGH16_03370) | - | 547388..548011 (+) | 624 | WP_003688215.1 | lytic transglycosylase domain-containing protein | - |
| EGH16_RS03375 (EGH16_03375) | - | 548123..549505 (+) | 1383 | WP_003688217.1 | MFS transporter | - |
| EGH16_RS03380 (EGH16_03380) | ssb | 549509..550033 (+) | 525 | WP_003695064.1 | single-stranded DNA-binding protein | Machinery gene |
| EGH16_RS03390 (EGH16_03390) | - | 550405..551328 (+) | 924 | WP_047920837.1 | DMT family transporter | - |
| EGH16_RS03395 (EGH16_03395) | fumC | 551393..552781 (-) | 1389 | WP_003691001.1 | class II fumarate hydratase | - |
| EGH16_RS03400 (EGH16_03400) | recP/tkt | 552925..554904 (-) | 1980 | WP_003688227.1 | transketolase | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19448.66 Da Isoelectric Point: 5.8313
>NTDB_id=287537 EGH16_RS03380 WP_003695064.1 549509..550033(+) (ssb) [Neisseria gonorrhoeae strain FQ01]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=287537 EGH16_RS03380 WP_003695064.1 549509..550033(+) (ssb) [Neisseria gonorrhoeae strain FQ01]
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| ssb | Neisseria meningitidis MC58 |
98.851 |
100 |
0.989 |
| ssb | Vibrio cholerae strain A1552 |
47.778 |
100 |
0.494 |
| ssb | Glaesserella parasuis strain SC1401 |
44.505 |
100 |
0.466 |